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LGFUS Public Data
Identification of alternative splicing markers for breast cancer
2. Breast Validation Screen
Transcript map
: CBFA2T3
Exon
Length: 545
Transcript: CBFA2T3.aAug05
Length: 545
Transcript: CBFA2T3.aAug05
Exon
Length: 153
Transcript: CBFA2T3.aAug05
Length: 153
Transcript: CBFA2T3.aAug05
Exon
Length: 75
Transcript: CBFA2T3.aAug05
Length: 75
Transcript: CBFA2T3.aAug05
Exon
Length: 242
Transcript: CBFA2T3.aAug05
Length: 242
Transcript: CBFA2T3.aAug05
Exon
Length: 90
Transcript: CBFA2T3.aAug05
Length: 90
Transcript: CBFA2T3.aAug05
Exon
Length: 182
Transcript: CBFA2T3.aAug05
Length: 182
Transcript: CBFA2T3.aAug05
Exon
Length: 224
Transcript: CBFA2T3.aAug05
Length: 224
Transcript: CBFA2T3.aAug05
Exon
Length: 86
Transcript: CBFA2T3.aAug05
Length: 86
Transcript: CBFA2T3.aAug05
Exon
Length: 199
Transcript: CBFA2T3.aAug05
Length: 199
Transcript: CBFA2T3.aAug05
Exon
Length: 69
Transcript: CBFA2T3.aAug05
Length: 69
Transcript: CBFA2T3.aAug05
Exon
Length: 191
Transcript: CBFA2T3.aAug05
Length: 191
Transcript: CBFA2T3.aAug05
Exon
Length: 2421
Transcript: CBFA2T3.aAug05
Length: 2421
Transcript: CBFA2T3.aAug05
Intron
Length: 75000
Transcript: CBFA2T3.aAug05
Length: 75000
Transcript: CBFA2T3.aAug05
Intron
Length: 3351
Transcript: CBFA2T3.aAug05
Length: 3351
Transcript: CBFA2T3.aAug05
Intron
Length: 5592
Transcript: CBFA2T3.aAug05
Length: 5592
Transcript: CBFA2T3.aAug05
Intron
Length: 272
Transcript: CBFA2T3.aAug05
Length: 272
Transcript: CBFA2T3.aAug05
Intron
Length: 5739
Transcript: CBFA2T3.aAug05
Length: 5739
Transcript: CBFA2T3.aAug05
Intron
Length: 691
Transcript: CBFA2T3.aAug05
Length: 691
Transcript: CBFA2T3.aAug05
Intron
Length: 2284
Transcript: CBFA2T3.aAug05
Length: 2284
Transcript: CBFA2T3.aAug05
Intron
Length: 1186
Transcript: CBFA2T3.aAug05
Length: 1186
Transcript: CBFA2T3.aAug05
Intron
Length: 502
Transcript: CBFA2T3.aAug05
Length: 502
Transcript: CBFA2T3.aAug05
Intron
Length: 1259
Transcript: CBFA2T3.aAug05
Length: 1259
Transcript: CBFA2T3.aAug05
Intron
Length: 1994
Transcript: CBFA2T3.aAug05
Length: 1994
Transcript: CBFA2T3.aAug05
Reaction
Expected peak: 261
Associated peak: 274,275,277,278,279,280,281,289
Repeated 51 time
Molarity: 3.94M
Forward: CBFA2T3.F2
Reverse: CBFA2T3.R2
Expected peak: 261
Associated peak: 274,275,277,278,279,280,281,289
Repeated 51 time
Molarity: 3.94M
Forward: CBFA2T3.F2
Reverse: CBFA2T3.R2
Exon
Length: 181
Transcript: CBFA2T3.bAug05
Length: 181
Transcript: CBFA2T3.bAug05
Exon
Length: 153
Transcript: CBFA2T3.bAug05
Length: 153
Transcript: CBFA2T3.bAug05
Exon
Length: 242
Transcript: CBFA2T3.bAug05
Length: 242
Transcript: CBFA2T3.bAug05
Exon
Length: 90
Transcript: CBFA2T3.bAug05
Length: 90
Transcript: CBFA2T3.bAug05
Exon
Length: 182
Transcript: CBFA2T3.bAug05
Length: 182
Transcript: CBFA2T3.bAug05
Exon
Length: 224
Transcript: CBFA2T3.bAug05
Length: 224
Transcript: CBFA2T3.bAug05
Exon
Length: 86
Transcript: CBFA2T3.bAug05
Length: 86
Transcript: CBFA2T3.bAug05
Exon
Length: 199
Transcript: CBFA2T3.bAug05
Length: 199
Transcript: CBFA2T3.bAug05
Exon
Length: 69
Transcript: CBFA2T3.bAug05
Length: 69
Transcript: CBFA2T3.bAug05
Exon
Length: 191
Transcript: CBFA2T3.bAug05
Length: 191
Transcript: CBFA2T3.bAug05
Exon
Length: 2417
Transcript: CBFA2T3.bAug05
Length: 2417
Transcript: CBFA2T3.bAug05
Intron
Length: 39363
Transcript: CBFA2T3.bAug05
Length: 39363
Transcript: CBFA2T3.bAug05
Intron
Length: 9018
Transcript: CBFA2T3.bAug05
Length: 9018
Transcript: CBFA2T3.bAug05
Intron
Length: 272
Transcript: CBFA2T3.bAug05
Length: 272
Transcript: CBFA2T3.bAug05
Intron
Length: 5739
Transcript: CBFA2T3.bAug05
Length: 5739
Transcript: CBFA2T3.bAug05
Intron
Length: 691
Transcript: CBFA2T3.bAug05
Length: 691
Transcript: CBFA2T3.bAug05
Intron
Length: 2284
Transcript: CBFA2T3.bAug05
Length: 2284
Transcript: CBFA2T3.bAug05
Intron
Length: 1186
Transcript: CBFA2T3.bAug05
Length: 1186
Transcript: CBFA2T3.bAug05
Intron
Length: 502
Transcript: CBFA2T3.bAug05
Length: 502
Transcript: CBFA2T3.bAug05
Intron
Length: 1259
Transcript: CBFA2T3.bAug05
Length: 1259
Transcript: CBFA2T3.bAug05
Intron
Length: 1994
Transcript: CBFA2T3.bAug05
Length: 1994
Transcript: CBFA2T3.bAug05
Reaction
Expected peak: 186
Associated peak: 198,199,202,204,205,206,214,216
Repeated 51 time
Molarity: 6.64M
Forward: CBFA2T3.F2
Reverse: CBFA2T3.R2
Expected peak: 186
Associated peak: 198,199,202,204,205,206,214,216
Repeated 51 time
Molarity: 6.64M
Forward: CBFA2T3.F2
Reverse: CBFA2T3.R2
Exon
Length: 438
Transcript: CBFA2T3.cAug05
Length: 438
Transcript: CBFA2T3.cAug05
Exon
Length: 191
Transcript: CBFA2T3.cAug05
Length: 191
Transcript: CBFA2T3.cAug05
Exon
Length: 1751
Transcript: CBFA2T3.cAug05
Length: 1751
Transcript: CBFA2T3.cAug05
Intron
Length: 1259
Transcript: CBFA2T3.cAug05
Length: 1259
Transcript: CBFA2T3.cAug05
Intron
Length: 1994
Transcript: CBFA2T3.cAug05
Length: 1994
Transcript: CBFA2T3.cAug05
Exon
Length: 424
Transcript: CBFA2T3.dAug05
Length: 424
Transcript: CBFA2T3.dAug05
Exon
Length: 153
Transcript: CBFA2T3.dAug05
Length: 153
Transcript: CBFA2T3.dAug05
Exon
Length: 87
Transcript: CBFA2T3.dAug05
Length: 87
Transcript: CBFA2T3.dAug05
Intron
Length: 75000
Transcript: CBFA2T3.dAug05
Length: 75000
Transcript: CBFA2T3.dAug05
Intron
Length: 9018
Transcript: CBFA2T3.dAug05
Length: 9018
Transcript: CBFA2T3.dAug05
Reaction
Expected peak: 186
Associated peak: 198,199,202,204,205,206,214,216
Repeated 51 time
Molarity: 6.64M
Forward: CBFA2T3.F2
Reverse: CBFA2T3.R2
Expected peak: 186
Associated peak: 198,199,202,204,205,206,214,216
Repeated 51 time
Molarity: 6.64M
Forward: CBFA2T3.F2
Reverse: CBFA2T3.R2
Exon
Length: 767
Transcript: CBFA2T3.eAug05
Length: 767
Transcript: CBFA2T3.eAug05
Exon
Length: 1048
Transcript: CBFA2T3.eAug05
Length: 1048
Transcript: CBFA2T3.eAug05
Intron
Length: 1994
Transcript: CBFA2T3.eAug05
Length: 1994
Transcript: CBFA2T3.eAug05
Exon
Length: 21
Transcript: CBFA2T3.fAug05
Length: 21
Transcript: CBFA2T3.fAug05
Exon
Length: 161
Transcript: CBFA2T3.fAug05
Length: 161
Transcript: CBFA2T3.fAug05
Exon
Length: 69
Transcript: CBFA2T3.fAug05
Length: 69
Transcript: CBFA2T3.fAug05
Exon
Length: 21
Transcript: CBFA2T3.fAug05
Length: 21
Transcript: CBFA2T3.fAug05
Intron
Length: 142
Transcript: CBFA2T3.fAug05
Length: 142
Transcript: CBFA2T3.fAug05
Intron
Length: 199
Transcript: CBFA2T3.fAug05
Length: 199
Transcript: CBFA2T3.fAug05
Intron
Length: 1259
Transcript: CBFA2T3.fAug05
Length: 1259
Transcript: CBFA2T3.fAug05
Exon
Length: 181
Transcript: CBFA2T3.gAug05
Length: 181
Transcript: CBFA2T3.gAug05
Exon
Length: 153
Transcript: CBFA2T3.gAug05
Length: 153
Transcript: CBFA2T3.gAug05
Exon
Length: 65
Transcript: CBFA2T3.gAug05
Length: 65
Transcript: CBFA2T3.gAug05
Intron
Length: 39363
Transcript: CBFA2T3.gAug05
Length: 39363
Transcript: CBFA2T3.gAug05
Intron
Length: 3351
Transcript: CBFA2T3.gAug05
Length: 3351
Transcript: CBFA2T3.gAug05
Exon
Length: 185
Transcript: CBFA2T3.hAug05
Length: 185
Transcript: CBFA2T3.hAug05
Exon
Length: 82
Transcript: CBFA2T3.hAug05
Length: 82
Transcript: CBFA2T3.hAug05
Intron
Length: 55934
Transcript: CBFA2T3.hAug05
Length: 55934
Transcript: CBFA2T3.hAug05
Exon
Length: 462
Transcript: CBFA2T3.shed1.aAug05
Length: 462
Transcript: CBFA2T3.shed1.aAug05
CBFA2T3.F2
AGTGGACAGGAAAGCTAAGGC
AGTGGACAGGAAAGCTAAGGC
CBFA2T3.R2
TTGATGGCTGTTGGTGAGTG
TTGATGGCTGTTGGTGAGTG