2. Breast Validation Screen - Rnomics 📊 Palace

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Home Public data LGFUS Public Data Identification of alternative splicing markers for breast cancer 2. Breast Validation Screen

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https://rnomics.med.usherbrooke.ca/palace?purl=/data/related/3/gene/488756

2. Breast Validation Screen ⚙

Transcript map : FANCA

Exon
Length: 121
Transcript: FANCA.aAug05

Exon
Length: 110
Transcript: FANCA.aAug05

Exon
Length: 94
Transcript: FANCA.aAug05

Exon
Length: 143
Transcript: FANCA.aAug05

Exon
Length: 96
Transcript: FANCA.aAug05

Exon
Length: 74
Transcript: FANCA.aAug05

Exon
Length: 113
Transcript: FANCA.aAug05

Exon
Length: 83
Transcript: FANCA.aAug05

Exon
Length: 34
Transcript: FANCA.aAug05

Exon
Length: 67
Transcript: FANCA.aAug05

Exon
Length: 113
Transcript: FANCA.aAug05

Exon
Length: 77
Transcript: FANCA.aAug05

Exon
Length: 142
Transcript: FANCA.aAug05

Exon
Length: 134
Transcript: FANCA.aAug05

Exon
Length: 111
Transcript: FANCA.aAug05

Exon
Length: 96
Transcript: FANCA.aAug05

Exon
Length: 60
Transcript: FANCA.aAug05

Exon
Length: 89
Transcript: FANCA.aAug05

Exon
Length: 61
Transcript: FANCA.aAug05

Exon
Length: 50
Transcript: FANCA.aAug05

Exon
Length: 74
Transcript: FANCA.aAug05

Exon
Length: 114
Transcript: FANCA.aAug05

Exon
Length: 137
Transcript: FANCA.aAug05

Exon
Length: 71
Transcript: FANCA.aAug05

Exon
Length: 94
Transcript: FANCA.aAug05

Exon
Length: 188
Transcript: FANCA.aAug05

Exon
Length: 97
Transcript: FANCA.aAug05

Exon
Length: 177
Transcript: FANCA.aAug05

Exon
Length: 74
Transcript: FANCA.aAug05

Exon
Length: 129
Transcript: FANCA.aAug05

Exon
Length: 85
Transcript: FANCA.aAug05

Exon
Length: 173
Transcript: FANCA.aAug05

Exon
Length: 109
Transcript: FANCA.aAug05

Exon
Length: 60
Transcript: FANCA.aAug05

Exon
Length: 105
Transcript: FANCA.aAug05

Exon
Length: 113
Transcript: FANCA.aAug05

Exon
Length: 139
Transcript: FANCA.aAug05

Exon
Length: 63
Transcript: FANCA.aAug05

Exon
Length: 106
Transcript: FANCA.aAug05

Exon
Length: 76
Transcript: FANCA.aAug05

Exon
Length: 157
Transcript: FANCA.aAug05

Exon
Length: 93
Transcript: FANCA.aAug05

Exon
Length: 1158
Transcript: FANCA.aAug05

Intron
Length: 550
Transcript: FANCA.aAug05

Intron
Length: 1263
Transcript: FANCA.aAug05

Intron
Length: 3448
Transcript: FANCA.aAug05

Intron
Length: 126
Transcript: FANCA.aAug05

Intron
Length: 2339
Transcript: FANCA.aAug05

Intron
Length: 2901
Transcript: FANCA.aAug05

Intron
Length: 1938
Transcript: FANCA.aAug05

Intron
Length: 3620
Transcript: FANCA.aAug05

Intron
Length: 372
Transcript: FANCA.aAug05

Intron
Length: 3147
Transcript: FANCA.aAug05

Intron
Length: 3358
Transcript: FANCA.aAug05

Intron
Length: 402
Transcript: FANCA.aAug05

Intron
Length: 390
Transcript: FANCA.aAug05

Intron
Length: 6438
Transcript: FANCA.aAug05

Intron
Length: 1751
Transcript: FANCA.aAug05

Intron
Length: 88
Transcript: FANCA.aAug05

Intron
Length: 2901
Transcript: FANCA.aAug05

Intron
Length: 865
Transcript: FANCA.aAug05

Intron
Length: 92
Transcript: FANCA.aAug05

Intron
Length: 2985
Transcript: FANCA.aAug05

Intron
Length: 2357
Transcript: FANCA.aAug05

Intron
Length: 1456
Transcript: FANCA.aAug05

Intron
Length: 1043
Transcript: FANCA.aAug05

Intron
Length: 304
Transcript: FANCA.aAug05

Intron
Length: 141
Transcript: FANCA.aAug05

Intron
Length: 2599
Transcript: FANCA.aAug05

Intron
Length: 2074
Transcript: FANCA.aAug05

Intron
Length: 2867
Transcript: FANCA.aAug05

Intron
Length: 3243
Transcript: FANCA.aAug05

Intron
Length: 6354
Transcript: FANCA.aAug05

Intron
Length: 2235
Transcript: FANCA.aAug05

Intron
Length: 962
Transcript: FANCA.aAug05

Intron
Length: 1768
Transcript: FANCA.aAug05

Intron
Length: 142
Transcript: FANCA.aAug05

Intron
Length: 1512
Transcript: FANCA.aAug05

Intron
Length: 2020
Transcript: FANCA.aAug05

Intron
Length: 1933
Transcript: FANCA.aAug05

Intron
Length: 704
Transcript: FANCA.aAug05

Intron
Length: 440
Transcript: FANCA.aAug05

Intron
Length: 188
Transcript: FANCA.aAug05

Intron
Length: 158
Transcript: FANCA.aAug05

Intron
Length: 173
Transcript: FANCA.aAug05

Reaction
Expected peak: 231
Associated peak: 240,241,242,243,244,250,251
Repeated 51 time
Molarity: 15.74M
Forward: FANCA.F13
Reverse: FANCA.R13

Reaction
Expected peak: 247
Associated peak: 255,256,257,258,259,269,271,273
Repeated 51 time
Molarity: 6.57M
Forward: FANCA.F14
Reverse: FANCA.R14

Reaction
Expected peak: 296
Associated peak: 295,296,297,298,299
Repeated 51 time
Molarity: 23.34M
Forward: FANCA.F13
Reverse: FANCA.R12

Exon
Length: 48
Transcript: FANCA.bAug05

Exon
Length: 177
Transcript: FANCA.bAug05

Exon
Length: 74
Transcript: FANCA.bAug05

Exon
Length: 85
Transcript: FANCA.bAug05

Exon
Length: 173
Transcript: FANCA.bAug05

Exon
Length: 109
Transcript: FANCA.bAug05

Exon
Length: 60
Transcript: FANCA.bAug05

Exon
Length: 105
Transcript: FANCA.bAug05

Exon
Length: 113
Transcript: FANCA.bAug05

Exon
Length: 139
Transcript: FANCA.bAug05

Exon
Length: 63
Transcript: FANCA.bAug05

Exon
Length: 106
Transcript: FANCA.bAug05

Exon
Length: 76
Transcript: FANCA.bAug05

Exon
Length: 161
Transcript: FANCA.bAug05

Exon
Length: 93
Transcript: FANCA.bAug05

Exon
Length: 186
Transcript: FANCA.bAug05

Intron
Length: 2074
Transcript: FANCA.bAug05

Intron
Length: 2867
Transcript: FANCA.bAug05

Intron
Length: 9726
Transcript: FANCA.bAug05

Intron
Length: 2235
Transcript: FANCA.bAug05

Intron
Length: 962
Transcript: FANCA.bAug05

Intron
Length: 1768
Transcript: FANCA.bAug05

Intron
Length: 142
Transcript: FANCA.bAug05

Intron
Length: 1512
Transcript: FANCA.bAug05

Intron
Length: 2020
Transcript: FANCA.bAug05

Intron
Length: 1933
Transcript: FANCA.bAug05

Intron
Length: 704
Transcript: FANCA.bAug05

Intron
Length: 440
Transcript: FANCA.bAug05

Intron
Length: 188
Transcript: FANCA.bAug05

Intron
Length: 154
Transcript: FANCA.bAug05

Intron
Length: 173
Transcript: FANCA.bAug05

Reaction
Expected peak: 102
Associated peak: 104,105,106,107,108
Repeated 51 time
Molarity: 9.71M
Forward: FANCA.F13
Reverse: FANCA.R13

Reaction
Expected peak: 118
Associated peak: 122,123,124,125,126,133,134,135
Repeated 51 time
Molarity: 2.18M
Forward: FANCA.F14
Reverse: FANCA.R14

Reaction
Expected peak: 167
Associated peak: 175,177,178,179,180,181,182,186
Repeated 51 time
Molarity: 13.59M
Forward: FANCA.F13
Reverse: FANCA.R12

Exon
Length: 99
Transcript: FANCA.cAug05

Exon
Length: 110
Transcript: FANCA.cAug05

Exon
Length: 94
Transcript: FANCA.cAug05

Exon
Length: 143
Transcript: FANCA.cAug05

Exon
Length: 96
Transcript: FANCA.cAug05

Exon
Length: 74
Transcript: FANCA.cAug05

Exon
Length: 113
Transcript: FANCA.cAug05

Exon
Length: 83
Transcript: FANCA.cAug05

Exon
Length: 34
Transcript: FANCA.cAug05

Exon
Length: 848
Transcript: FANCA.cAug05

Intron
Length: 550
Transcript: FANCA.cAug05

Intron
Length: 1263
Transcript: FANCA.cAug05

Intron
Length: 3448
Transcript: FANCA.cAug05

Intron
Length: 126
Transcript: FANCA.cAug05

Intron
Length: 2339
Transcript: FANCA.cAug05

Intron
Length: 2901
Transcript: FANCA.cAug05

Intron
Length: 1938
Transcript: FANCA.cAug05

Intron
Length: 3620
Transcript: FANCA.cAug05

Intron
Length: 372
Transcript: FANCA.cAug05

Exon
Length: 121
Transcript: FANCA.dAug05

Exon
Length: 110
Transcript: FANCA.dAug05

Exon
Length: 94
Transcript: FANCA.dAug05

Exon
Length: 143
Transcript: FANCA.dAug05

Exon
Length: 96
Transcript: FANCA.dAug05

Exon
Length: 74
Transcript: FANCA.dAug05

Exon
Length: 113
Transcript: FANCA.dAug05

Exon
Length: 83
Transcript: FANCA.dAug05

Exon
Length: 34
Transcript: FANCA.dAug05

Exon
Length: 67
Transcript: FANCA.dAug05

Exon
Length: 721
Transcript: FANCA.dAug05

Intron
Length: 550
Transcript: FANCA.dAug05

Intron
Length: 1263
Transcript: FANCA.dAug05

Intron
Length: 3448
Transcript: FANCA.dAug05

Intron
Length: 126
Transcript: FANCA.dAug05

Intron
Length: 2339
Transcript: FANCA.dAug05

Intron
Length: 2901
Transcript: FANCA.dAug05

Intron
Length: 1938
Transcript: FANCA.dAug05

Intron
Length: 3620
Transcript: FANCA.dAug05

Intron
Length: 372
Transcript: FANCA.dAug05

Intron
Length: 86
Transcript: FANCA.dAug05

Exon
Length: 176
Transcript: FANCA.eAug05

Exon
Length: 97
Transcript: FANCA.eAug05

Exon
Length: 177
Transcript: FANCA.eAug05

Exon
Length: 74
Transcript: FANCA.eAug05

Exon
Length: 129
Transcript: FANCA.eAug05

Exon
Length: 173
Transcript: FANCA.eAug05

Exon
Length: 109
Transcript: FANCA.eAug05

Exon
Length: 60
Transcript: FANCA.eAug05

Exon
Length: 105
Transcript: FANCA.eAug05

Exon
Length: 385
Transcript: FANCA.eAug05

Intron
Length: 2599
Transcript: FANCA.eAug05

Intron
Length: 2074
Transcript: FANCA.eAug05

Intron
Length: 2867
Transcript: FANCA.eAug05

Intron
Length: 3243
Transcript: FANCA.eAug05

Intron
Length: 8674
Transcript: FANCA.eAug05

Intron
Length: 962
Transcript: FANCA.eAug05

Intron
Length: 1768
Transcript: FANCA.eAug05

Intron
Length: 142
Transcript: FANCA.eAug05

Intron
Length: 1512
Transcript: FANCA.eAug05

Reaction
Expected peak: 211
Associated peak: 225,226,227,228,235
Repeated 51 time
Molarity: 0.89M
Forward: FANCA.F13
Reverse: FANCA.R12

Exon
Length: 53
Transcript: FANCA.fAug05

Exon
Length: 113
Transcript: FANCA.fAug05

Exon
Length: 63
Transcript: FANCA.fAug05

Exon
Length: 106
Transcript: FANCA.fAug05

Exon
Length: 76
Transcript: FANCA.fAug05

Exon
Length: 157
Transcript: FANCA.fAug05

Exon
Length: 93
Transcript: FANCA.fAug05

Exon
Length: 168
Transcript: FANCA.fAug05

Intron
Length: 1512
Transcript: FANCA.fAug05

Intron
Length: 4092
Transcript: FANCA.fAug05

Intron
Length: 704
Transcript: FANCA.fAug05

Intron
Length: 440
Transcript: FANCA.fAug05

Intron
Length: 188
Transcript: FANCA.fAug05

Intron
Length: 158
Transcript: FANCA.fAug05

Intron
Length: 173
Transcript: FANCA.fAug05

Exon
Length: 104
Transcript: FANCA.gAug05

Exon
Length: 139
Transcript: FANCA.gAug05

Exon
Length: 63
Transcript: FANCA.gAug05

Exon
Length: 106
Transcript: FANCA.gAug05

Exon
Length: 129
Transcript: FANCA.gAug05

Exon
Length: 93
Transcript: FANCA.gAug05

Exon
Length: 134
Transcript: FANCA.gAug05

Intron
Length: 2020
Transcript: FANCA.gAug05

Intron
Length: 1933
Transcript: FANCA.gAug05

Intron
Length: 704
Transcript: FANCA.gAug05

Intron
Length: 727
Transcript: FANCA.gAug05

Intron
Length: 163
Transcript: FANCA.gAug05

Intron
Length: 173
Transcript: FANCA.gAug05

Exon
Length: 50
Transcript: FANCA.hAug05

Exon
Length: 63
Transcript: FANCA.hAug05

Exon
Length: 698
Transcript: FANCA.hAug05

Intron
Length: 4092
Transcript: FANCA.hAug05

Intron
Length: 704
Transcript: FANCA.hAug05

Exon
Length: 89
Transcript: FANCA.iAug05

Exon
Length: 61
Transcript: FANCA.iAug05

Exon
Length: 50
Transcript: FANCA.iAug05

Exon
Length: 122
Transcript: FANCA.iAug05

Exon
Length: 74
Transcript: FANCA.iAug05

Exon
Length: 65
Transcript: FANCA.iAug05

Intron
Length: 865
Transcript: FANCA.iAug05

Intron
Length: 92
Transcript: FANCA.iAug05

Intron
Length: 338
Transcript: FANCA.iAug05

Intron
Length: 2525
Transcript: FANCA.iAug05

Intron
Length: 2357
Transcript: FANCA.iAug05

Exon
Length: 732
Transcript: FANCA.shed1.aAug05

Exon
Length: 525
Transcript: FANCA.shed2.aAug05

Exon
Length: 385
Transcript: FANCA.shed3.aAug05

Exon
Length: 617
Transcript: FANCA.shed4.aAug05

Exon
Length: 244
Transcript: FANCA.shed5.aAug05

FANCA.R12
GAGAGGCACTATGAGGTCTTGC

FANCA.R14
GCCACCAAAGACCAAATCAG

FANCA.F13
AACCTGAAGCTGATGCTCTTTC

FANCA.F14
TTACCAAGACTGGTTACACCTGG

FANCA.R13
TATCCTCATTTCCTGTGCGG

Gene primer pair list : Primer pairs

Forward	Reverse	Occurences	View
FANCA.F13	FANCA.R12	51	View
FANCA.F13	FANCA.R13	51	View
FANCA.F14	FANCA.R14	51	View

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