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LGFUS Public Data
Identification of alternative splicing markers for breast cancer
2. Breast Validation Screen
Transcript map
: MMP2
Exon
Length: 662
Transcript: MMP2.aAug05
Length: 662
Transcript: MMP2.aAug05
Exon
Length: 227
Transcript: MMP2.aAug05
Length: 227
Transcript: MMP2.aAug05
Exon
Length: 149
Transcript: MMP2.aAug05
Length: 149
Transcript: MMP2.aAug05
Exon
Length: 129
Transcript: MMP2.aAug05
Length: 129
Transcript: MMP2.aAug05
Exon
Length: 174
Transcript: MMP2.aAug05
Length: 174
Transcript: MMP2.aAug05
Exon
Length: 174
Transcript: MMP2.aAug05
Length: 174
Transcript: MMP2.aAug05
Exon
Length: 174
Transcript: MMP2.aAug05
Length: 174
Transcript: MMP2.aAug05
Exon
Length: 156
Transcript: MMP2.aAug05
Length: 156
Transcript: MMP2.aAug05
Exon
Length: 136
Transcript: MMP2.aAug05
Length: 136
Transcript: MMP2.aAug05
Exon
Length: 137
Transcript: MMP2.aAug05
Length: 137
Transcript: MMP2.aAug05
Exon
Length: 160
Transcript: MMP2.aAug05
Length: 160
Transcript: MMP2.aAug05
Exon
Length: 110
Transcript: MMP2.aAug05
Length: 110
Transcript: MMP2.aAug05
Exon
Length: 1353
Transcript: MMP2.aAug05
Length: 1353
Transcript: MMP2.aAug05
Intron
Length: 3276
Transcript: MMP2.aAug05
Length: 3276
Transcript: MMP2.aAug05
Intron
Length: 880
Transcript: MMP2.aAug05
Length: 880
Transcript: MMP2.aAug05
Intron
Length: 1134
Transcript: MMP2.aAug05
Length: 1134
Transcript: MMP2.aAug05
Intron
Length: 176
Transcript: MMP2.aAug05
Length: 176
Transcript: MMP2.aAug05
Intron
Length: 2765
Transcript: MMP2.aAug05
Length: 2765
Transcript: MMP2.aAug05
Intron
Length: 934
Transcript: MMP2.aAug05
Length: 934
Transcript: MMP2.aAug05
Intron
Length: 1976
Transcript: MMP2.aAug05
Length: 1976
Transcript: MMP2.aAug05
Intron
Length: 1201
Transcript: MMP2.aAug05
Length: 1201
Transcript: MMP2.aAug05
Intron
Length: 3632
Transcript: MMP2.aAug05
Length: 3632
Transcript: MMP2.aAug05
Intron
Length: 1226
Transcript: MMP2.aAug05
Length: 1226
Transcript: MMP2.aAug05
Intron
Length: 4330
Transcript: MMP2.aAug05
Length: 4330
Transcript: MMP2.aAug05
Intron
Length: 2450
Transcript: MMP2.aAug05
Length: 2450
Transcript: MMP2.aAug05
Reaction
Expected peak: 375
Associated peak: None
Repeated 51 time
Molarity: 0.00M
Forward: MMP2.u.f.4
Reverse: MMP2.u.r.3
Expected peak: 375
Associated peak: None
Repeated 51 time
Molarity: 0.00M
Forward: MMP2.u.f.4
Reverse: MMP2.u.r.3
Exon
Length: 336
Transcript: MMP2.bAug05
Length: 336
Transcript: MMP2.bAug05
Exon
Length: 274
Transcript: MMP2.bAug05
Length: 274
Transcript: MMP2.bAug05
Exon
Length: 227
Transcript: MMP2.bAug05
Length: 227
Transcript: MMP2.bAug05
Exon
Length: 149
Transcript: MMP2.bAug05
Length: 149
Transcript: MMP2.bAug05
Exon
Length: 129
Transcript: MMP2.bAug05
Length: 129
Transcript: MMP2.bAug05
Exon
Length: 174
Transcript: MMP2.bAug05
Length: 174
Transcript: MMP2.bAug05
Exon
Length: 174
Transcript: MMP2.bAug05
Length: 174
Transcript: MMP2.bAug05
Exon
Length: 174
Transcript: MMP2.bAug05
Length: 174
Transcript: MMP2.bAug05
Exon
Length: 156
Transcript: MMP2.bAug05
Length: 156
Transcript: MMP2.bAug05
Exon
Length: 136
Transcript: MMP2.bAug05
Length: 136
Transcript: MMP2.bAug05
Exon
Length: 137
Transcript: MMP2.bAug05
Length: 137
Transcript: MMP2.bAug05
Exon
Length: 160
Transcript: MMP2.bAug05
Length: 160
Transcript: MMP2.bAug05
Exon
Length: 110
Transcript: MMP2.bAug05
Length: 110
Transcript: MMP2.bAug05
Exon
Length: 907
Transcript: MMP2.bAug05
Length: 907
Transcript: MMP2.bAug05
Intron
Length: 74516
Transcript: MMP2.bAug05
Length: 74516
Transcript: MMP2.bAug05
Intron
Length: 18083
Transcript: MMP2.bAug05
Length: 18083
Transcript: MMP2.bAug05
Intron
Length: 880
Transcript: MMP2.bAug05
Length: 880
Transcript: MMP2.bAug05
Intron
Length: 1134
Transcript: MMP2.bAug05
Length: 1134
Transcript: MMP2.bAug05
Intron
Length: 176
Transcript: MMP2.bAug05
Length: 176
Transcript: MMP2.bAug05
Intron
Length: 2765
Transcript: MMP2.bAug05
Length: 2765
Transcript: MMP2.bAug05
Intron
Length: 934
Transcript: MMP2.bAug05
Length: 934
Transcript: MMP2.bAug05
Intron
Length: 1976
Transcript: MMP2.bAug05
Length: 1976
Transcript: MMP2.bAug05
Intron
Length: 1201
Transcript: MMP2.bAug05
Length: 1201
Transcript: MMP2.bAug05
Intron
Length: 3632
Transcript: MMP2.bAug05
Length: 3632
Transcript: MMP2.bAug05
Intron
Length: 1226
Transcript: MMP2.bAug05
Length: 1226
Transcript: MMP2.bAug05
Intron
Length: 4330
Transcript: MMP2.bAug05
Length: 4330
Transcript: MMP2.bAug05
Intron
Length: 2450
Transcript: MMP2.bAug05
Length: 2450
Transcript: MMP2.bAug05
Exon
Length: 75
Transcript: MMP2.cAug05
Length: 75
Transcript: MMP2.cAug05
Exon
Length: 71
Transcript: MMP2.cAug05
Length: 71
Transcript: MMP2.cAug05
Exon
Length: 227
Transcript: MMP2.cAug05
Length: 227
Transcript: MMP2.cAug05
Exon
Length: 149
Transcript: MMP2.cAug05
Length: 149
Transcript: MMP2.cAug05
Exon
Length: 129
Transcript: MMP2.cAug05
Length: 129
Transcript: MMP2.cAug05
Exon
Length: 174
Transcript: MMP2.cAug05
Length: 174
Transcript: MMP2.cAug05
Exon
Length: 82
Transcript: MMP2.cAug05
Length: 82
Transcript: MMP2.cAug05
Intron
Length: 281
Transcript: MMP2.cAug05
Length: 281
Transcript: MMP2.cAug05
Intron
Length: 3276
Transcript: MMP2.cAug05
Length: 3276
Transcript: MMP2.cAug05
Intron
Length: 880
Transcript: MMP2.cAug05
Length: 880
Transcript: MMP2.cAug05
Intron
Length: 1134
Transcript: MMP2.cAug05
Length: 1134
Transcript: MMP2.cAug05
Intron
Length: 176
Transcript: MMP2.cAug05
Length: 176
Transcript: MMP2.cAug05
Intron
Length: 2765
Transcript: MMP2.cAug05
Length: 2765
Transcript: MMP2.cAug05
Reaction
Expected peak: 94
Associated peak: None
Repeated 51 time
Molarity: 0.00M
Forward: MMP2.u.f.4
Reverse: MMP2.u.r.3
Expected peak: 94
Associated peak: None
Repeated 51 time
Molarity: 0.00M
Forward: MMP2.u.f.4
Reverse: MMP2.u.r.3
Exon
Length: 142
Transcript: MMP2.dAug05
Length: 142
Transcript: MMP2.dAug05
Exon
Length: 174
Transcript: MMP2.dAug05
Length: 174
Transcript: MMP2.dAug05
Exon
Length: 174
Transcript: MMP2.dAug05
Length: 174
Transcript: MMP2.dAug05
Exon
Length: 174
Transcript: MMP2.dAug05
Length: 174
Transcript: MMP2.dAug05
Exon
Length: 156
Transcript: MMP2.dAug05
Length: 156
Transcript: MMP2.dAug05
Intron
Length: 176
Transcript: MMP2.dAug05
Length: 176
Transcript: MMP2.dAug05
Intron
Length: 2765
Transcript: MMP2.dAug05
Length: 2765
Transcript: MMP2.dAug05
Intron
Length: 934
Transcript: MMP2.dAug05
Length: 934
Transcript: MMP2.dAug05
Intron
Length: 1976
Transcript: MMP2.dAug05
Length: 1976
Transcript: MMP2.dAug05
Exon
Length: 78
Transcript: MMP2.eAug05
Length: 78
Transcript: MMP2.eAug05
Exon
Length: 71
Transcript: MMP2.eAug05
Length: 71
Transcript: MMP2.eAug05
Exon
Length: 227
Transcript: MMP2.eAug05
Length: 227
Transcript: MMP2.eAug05
Exon
Length: 149
Transcript: MMP2.eAug05
Length: 149
Transcript: MMP2.eAug05
Exon
Length: 129
Transcript: MMP2.eAug05
Length: 129
Transcript: MMP2.eAug05
Exon
Length: 138
Transcript: MMP2.eAug05
Length: 138
Transcript: MMP2.eAug05
Intron
Length: 286
Transcript: MMP2.eAug05
Length: 286
Transcript: MMP2.eAug05
Intron
Length: 3276
Transcript: MMP2.eAug05
Length: 3276
Transcript: MMP2.eAug05
Intron
Length: 880
Transcript: MMP2.eAug05
Length: 880
Transcript: MMP2.eAug05
Intron
Length: 1134
Transcript: MMP2.eAug05
Length: 1134
Transcript: MMP2.eAug05
Intron
Length: 176
Transcript: MMP2.eAug05
Length: 176
Transcript: MMP2.eAug05
Reaction
Expected peak: 89
Associated peak: 81,82,83,84,90
Repeated 51 time
Molarity: 4.18M
Forward: MMP2.u.f.4
Reverse: MMP2.u.r.3
Expected peak: 89
Associated peak: 81,82,83,84,90
Repeated 51 time
Molarity: 4.18M
Forward: MMP2.u.f.4
Reverse: MMP2.u.r.3
Exon
Length: 58
Transcript: MMP2.fAug05
Length: 58
Transcript: MMP2.fAug05
Exon
Length: 227
Transcript: MMP2.fAug05
Length: 227
Transcript: MMP2.fAug05
Exon
Length: 149
Transcript: MMP2.fAug05
Length: 149
Transcript: MMP2.fAug05
Exon
Length: 129
Transcript: MMP2.fAug05
Length: 129
Transcript: MMP2.fAug05
Exon
Length: 174
Transcript: MMP2.fAug05
Length: 174
Transcript: MMP2.fAug05
Exon
Length: 59
Transcript: MMP2.fAug05
Length: 59
Transcript: MMP2.fAug05
Intron
Length: 2853
Transcript: MMP2.fAug05
Length: 2853
Transcript: MMP2.fAug05
Intron
Length: 880
Transcript: MMP2.fAug05
Length: 880
Transcript: MMP2.fAug05
Intron
Length: 1134
Transcript: MMP2.fAug05
Length: 1134
Transcript: MMP2.fAug05
Intron
Length: 176
Transcript: MMP2.fAug05
Length: 176
Transcript: MMP2.fAug05
Intron
Length: 2765
Transcript: MMP2.fAug05
Length: 2765
Transcript: MMP2.fAug05
Exon
Length: 155
Transcript: MMP2.gAug05
Length: 155
Transcript: MMP2.gAug05
Exon
Length: 137
Transcript: MMP2.gAug05
Length: 137
Transcript: MMP2.gAug05
Exon
Length: 160
Transcript: MMP2.gAug05
Length: 160
Transcript: MMP2.gAug05
Exon
Length: 110
Transcript: MMP2.gAug05
Length: 110
Transcript: MMP2.gAug05
Exon
Length: 867
Transcript: MMP2.gAug05
Length: 867
Transcript: MMP2.gAug05
Intron
Length: 3632
Transcript: MMP2.gAug05
Length: 3632
Transcript: MMP2.gAug05
Intron
Length: 1226
Transcript: MMP2.gAug05
Length: 1226
Transcript: MMP2.gAug05
Intron
Length: 4330
Transcript: MMP2.gAug05
Length: 4330
Transcript: MMP2.gAug05
Intron
Length: 2450
Transcript: MMP2.gAug05
Length: 2450
Transcript: MMP2.gAug05
Exon
Length: 2160
Transcript: MMP2.shed1.aAug05
Length: 2160
Transcript: MMP2.shed1.aAug05
Exon
Length: 817
Transcript: MMP2.shed2.aAug05
Length: 817
Transcript: MMP2.shed2.aAug05
MMP2.u.r.3
CTGCCAACTCTTTGTCCGTT
CTGCCAACTCTTTGTCCGTT
MMP2.u.f.4
TACAAAGGGATTGCCAGGAC
TACAAAGGGATTGCCAGGAC