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LGFUS Public Data
Identification of alternative splicing markers for breast cancer
2. Breast Validation Screen
Transcript map
: LIG3
Exon
Length: 100
Transcript: LIG3.aAug05
Length: 100
Transcript: LIG3.aAug05
Exon
Length: 551
Transcript: LIG3.aAug05
Length: 551
Transcript: LIG3.aAug05
Exon
Length: 144
Transcript: LIG3.aAug05
Length: 144
Transcript: LIG3.aAug05
Exon
Length: 198
Transcript: LIG3.aAug05
Length: 198
Transcript: LIG3.aAug05
Exon
Length: 152
Transcript: LIG3.aAug05
Length: 152
Transcript: LIG3.aAug05
Exon
Length: 167
Transcript: LIG3.aAug05
Length: 167
Transcript: LIG3.aAug05
Exon
Length: 78
Transcript: LIG3.aAug05
Length: 78
Transcript: LIG3.aAug05
Exon
Length: 169
Transcript: LIG3.aAug05
Length: 169
Transcript: LIG3.aAug05
Exon
Length: 156
Transcript: LIG3.aAug05
Length: 156
Transcript: LIG3.aAug05
Exon
Length: 132
Transcript: LIG3.aAug05
Length: 132
Transcript: LIG3.aAug05
Exon
Length: 80
Transcript: LIG3.aAug05
Length: 80
Transcript: LIG3.aAug05
Exon
Length: 88
Transcript: LIG3.aAug05
Length: 88
Transcript: LIG3.aAug05
Exon
Length: 78
Transcript: LIG3.aAug05
Length: 78
Transcript: LIG3.aAug05
Exon
Length: 124
Transcript: LIG3.aAug05
Length: 124
Transcript: LIG3.aAug05
Exon
Length: 143
Transcript: LIG3.aAug05
Length: 143
Transcript: LIG3.aAug05
Exon
Length: 75
Transcript: LIG3.aAug05
Length: 75
Transcript: LIG3.aAug05
Exon
Length: 147
Transcript: LIG3.aAug05
Length: 147
Transcript: LIG3.aAug05
Exon
Length: 196
Transcript: LIG3.aAug05
Length: 196
Transcript: LIG3.aAug05
Exon
Length: 122
Transcript: LIG3.aAug05
Length: 122
Transcript: LIG3.aAug05
Exon
Length: 741
Transcript: LIG3.aAug05
Length: 741
Transcript: LIG3.aAug05
Intron
Length: 2379
Transcript: LIG3.aAug05
Length: 2379
Transcript: LIG3.aAug05
Intron
Length: 2435
Transcript: LIG3.aAug05
Length: 2435
Transcript: LIG3.aAug05
Intron
Length: 3334
Transcript: LIG3.aAug05
Length: 3334
Transcript: LIG3.aAug05
Intron
Length: 1299
Transcript: LIG3.aAug05
Length: 1299
Transcript: LIG3.aAug05
Intron
Length: 556
Transcript: LIG3.aAug05
Length: 556
Transcript: LIG3.aAug05
Intron
Length: 120
Transcript: LIG3.aAug05
Length: 120
Transcript: LIG3.aAug05
Intron
Length: 488
Transcript: LIG3.aAug05
Length: 488
Transcript: LIG3.aAug05
Intron
Length: 1583
Transcript: LIG3.aAug05
Length: 1583
Transcript: LIG3.aAug05
Intron
Length: 1632
Transcript: LIG3.aAug05
Length: 1632
Transcript: LIG3.aAug05
Intron
Length: 378
Transcript: LIG3.aAug05
Length: 378
Transcript: LIG3.aAug05
Intron
Length: 1084
Transcript: LIG3.aAug05
Length: 1084
Transcript: LIG3.aAug05
Intron
Length: 393
Transcript: LIG3.aAug05
Length: 393
Transcript: LIG3.aAug05
Intron
Length: 307
Transcript: LIG3.aAug05
Length: 307
Transcript: LIG3.aAug05
Intron
Length: 579
Transcript: LIG3.aAug05
Length: 579
Transcript: LIG3.aAug05
Intron
Length: 332
Transcript: LIG3.aAug05
Length: 332
Transcript: LIG3.aAug05
Intron
Length: 1400
Transcript: LIG3.aAug05
Length: 1400
Transcript: LIG3.aAug05
Intron
Length: 505
Transcript: LIG3.aAug05
Length: 505
Transcript: LIG3.aAug05
Intron
Length: 563
Transcript: LIG3.aAug05
Length: 563
Transcript: LIG3.aAug05
Intron
Length: 1483
Transcript: LIG3.aAug05
Length: 1483
Transcript: LIG3.aAug05
Reaction
Expected peak: 378
Associated peak: 400,401,402,403,404,405,406,407,409
Repeated 51 time
Molarity: 15.85M
Forward: LIG3.u.f.1
Reverse: LIG3.u.r.6
Expected peak: 378
Associated peak: 400,401,402,403,404,405,406,407,409
Repeated 51 time
Molarity: 15.85M
Forward: LIG3.u.f.1
Reverse: LIG3.u.r.6
Exon
Length: 129
Transcript: LIG3.bAug05
Length: 129
Transcript: LIG3.bAug05
Exon
Length: 551
Transcript: LIG3.bAug05
Length: 551
Transcript: LIG3.bAug05
Exon
Length: 144
Transcript: LIG3.bAug05
Length: 144
Transcript: LIG3.bAug05
Exon
Length: 198
Transcript: LIG3.bAug05
Length: 198
Transcript: LIG3.bAug05
Exon
Length: 152
Transcript: LIG3.bAug05
Length: 152
Transcript: LIG3.bAug05
Exon
Length: 167
Transcript: LIG3.bAug05
Length: 167
Transcript: LIG3.bAug05
Exon
Length: 78
Transcript: LIG3.bAug05
Length: 78
Transcript: LIG3.bAug05
Exon
Length: 169
Transcript: LIG3.bAug05
Length: 169
Transcript: LIG3.bAug05
Exon
Length: 156
Transcript: LIG3.bAug05
Length: 156
Transcript: LIG3.bAug05
Exon
Length: 132
Transcript: LIG3.bAug05
Length: 132
Transcript: LIG3.bAug05
Exon
Length: 80
Transcript: LIG3.bAug05
Length: 80
Transcript: LIG3.bAug05
Exon
Length: 88
Transcript: LIG3.bAug05
Length: 88
Transcript: LIG3.bAug05
Exon
Length: 78
Transcript: LIG3.bAug05
Length: 78
Transcript: LIG3.bAug05
Exon
Length: 124
Transcript: LIG3.bAug05
Length: 124
Transcript: LIG3.bAug05
Exon
Length: 143
Transcript: LIG3.bAug05
Length: 143
Transcript: LIG3.bAug05
Exon
Length: 75
Transcript: LIG3.bAug05
Length: 75
Transcript: LIG3.bAug05
Exon
Length: 147
Transcript: LIG3.bAug05
Length: 147
Transcript: LIG3.bAug05
Exon
Length: 196
Transcript: LIG3.bAug05
Length: 196
Transcript: LIG3.bAug05
Exon
Length: 122
Transcript: LIG3.bAug05
Length: 122
Transcript: LIG3.bAug05
Exon
Length: 178
Transcript: LIG3.bAug05
Length: 178
Transcript: LIG3.bAug05
Intron
Length: 2379
Transcript: LIG3.bAug05
Length: 2379
Transcript: LIG3.bAug05
Intron
Length: 2435
Transcript: LIG3.bAug05
Length: 2435
Transcript: LIG3.bAug05
Intron
Length: 3334
Transcript: LIG3.bAug05
Length: 3334
Transcript: LIG3.bAug05
Intron
Length: 1299
Transcript: LIG3.bAug05
Length: 1299
Transcript: LIG3.bAug05
Intron
Length: 556
Transcript: LIG3.bAug05
Length: 556
Transcript: LIG3.bAug05
Intron
Length: 120
Transcript: LIG3.bAug05
Length: 120
Transcript: LIG3.bAug05
Intron
Length: 488
Transcript: LIG3.bAug05
Length: 488
Transcript: LIG3.bAug05
Intron
Length: 1583
Transcript: LIG3.bAug05
Length: 1583
Transcript: LIG3.bAug05
Intron
Length: 1632
Transcript: LIG3.bAug05
Length: 1632
Transcript: LIG3.bAug05
Intron
Length: 378
Transcript: LIG3.bAug05
Length: 378
Transcript: LIG3.bAug05
Intron
Length: 1084
Transcript: LIG3.bAug05
Length: 1084
Transcript: LIG3.bAug05
Intron
Length: 393
Transcript: LIG3.bAug05
Length: 393
Transcript: LIG3.bAug05
Intron
Length: 307
Transcript: LIG3.bAug05
Length: 307
Transcript: LIG3.bAug05
Intron
Length: 579
Transcript: LIG3.bAug05
Length: 579
Transcript: LIG3.bAug05
Intron
Length: 332
Transcript: LIG3.bAug05
Length: 332
Transcript: LIG3.bAug05
Intron
Length: 1400
Transcript: LIG3.bAug05
Length: 1400
Transcript: LIG3.bAug05
Intron
Length: 505
Transcript: LIG3.bAug05
Length: 505
Transcript: LIG3.bAug05
Intron
Length: 563
Transcript: LIG3.bAug05
Length: 563
Transcript: LIG3.bAug05
Intron
Length: 205
Transcript: LIG3.bAug05
Length: 205
Transcript: LIG3.bAug05
Reaction
Expected peak: 378
Associated peak: 400,401,402,403,404,405,406,407,409
Repeated 51 time
Molarity: 15.85M
Forward: LIG3.u.f.1
Reverse: LIG3.u.r.6
Expected peak: 378
Associated peak: 400,401,402,403,404,405,406,407,409
Repeated 51 time
Molarity: 15.85M
Forward: LIG3.u.f.1
Reverse: LIG3.u.r.6
Exon
Length: 70
Transcript: LIG3.cAug05
Length: 70
Transcript: LIG3.cAug05
Exon
Length: 321
Transcript: LIG3.cAug05
Length: 321
Transcript: LIG3.cAug05
Exon
Length: 144
Transcript: LIG3.cAug05
Length: 144
Transcript: LIG3.cAug05
Exon
Length: 198
Transcript: LIG3.cAug05
Length: 198
Transcript: LIG3.cAug05
Exon
Length: 352
Transcript: LIG3.cAug05
Length: 352
Transcript: LIG3.cAug05
Intron
Length: 2609
Transcript: LIG3.cAug05
Length: 2609
Transcript: LIG3.cAug05
Intron
Length: 2435
Transcript: LIG3.cAug05
Length: 2435
Transcript: LIG3.cAug05
Intron
Length: 3334
Transcript: LIG3.cAug05
Length: 3334
Transcript: LIG3.cAug05
Intron
Length: 1299
Transcript: LIG3.cAug05
Length: 1299
Transcript: LIG3.cAug05
Reaction
Expected peak: 148
Associated peak: 158,159,160,161
Repeated 51 time
Molarity: 3.10M
Forward: LIG3.u.f.1
Reverse: LIG3.u.r.6
Expected peak: 148
Associated peak: 158,159,160,161
Repeated 51 time
Molarity: 3.10M
Forward: LIG3.u.f.1
Reverse: LIG3.u.r.6
Exon
Length: 46
Transcript: LIG3.dAug05
Length: 46
Transcript: LIG3.dAug05
Exon
Length: 551
Transcript: LIG3.dAug05
Length: 551
Transcript: LIG3.dAug05
Exon
Length: 144
Transcript: LIG3.dAug05
Length: 144
Transcript: LIG3.dAug05
Exon
Length: 570
Transcript: LIG3.dAug05
Length: 570
Transcript: LIG3.dAug05
Intron
Length: 2379
Transcript: LIG3.dAug05
Length: 2379
Transcript: LIG3.dAug05
Intron
Length: 2435
Transcript: LIG3.dAug05
Length: 2435
Transcript: LIG3.dAug05
Intron
Length: 3334
Transcript: LIG3.dAug05
Length: 3334
Transcript: LIG3.dAug05
Reaction
Expected peak: 378
Associated peak: 400,401,402,403,404,405,406,407,409
Repeated 51 time
Molarity: 15.85M
Forward: LIG3.u.f.1
Reverse: LIG3.u.r.6
Expected peak: 378
Associated peak: 400,401,402,403,404,405,406,407,409
Repeated 51 time
Molarity: 15.85M
Forward: LIG3.u.f.1
Reverse: LIG3.u.r.6
Exon
Length: 141
Transcript: LIG3.eAug05
Length: 141
Transcript: LIG3.eAug05
Exon
Length: 80
Transcript: LIG3.eAug05
Length: 80
Transcript: LIG3.eAug05
Exon
Length: 88
Transcript: LIG3.eAug05
Length: 88
Transcript: LIG3.eAug05
Exon
Length: 78
Transcript: LIG3.eAug05
Length: 78
Transcript: LIG3.eAug05
Exon
Length: 124
Transcript: LIG3.eAug05
Length: 124
Transcript: LIG3.eAug05
Exon
Length: 143
Transcript: LIG3.eAug05
Length: 143
Transcript: LIG3.eAug05
Exon
Length: 75
Transcript: LIG3.eAug05
Length: 75
Transcript: LIG3.eAug05
Exon
Length: 597
Transcript: LIG3.eAug05
Length: 597
Transcript: LIG3.eAug05
Intron
Length: 378
Transcript: LIG3.eAug05
Length: 378
Transcript: LIG3.eAug05
Intron
Length: 1084
Transcript: LIG3.eAug05
Length: 1084
Transcript: LIG3.eAug05
Intron
Length: 393
Transcript: LIG3.eAug05
Length: 393
Transcript: LIG3.eAug05
Intron
Length: 307
Transcript: LIG3.eAug05
Length: 307
Transcript: LIG3.eAug05
Intron
Length: 579
Transcript: LIG3.eAug05
Length: 579
Transcript: LIG3.eAug05
Intron
Length: 332
Transcript: LIG3.eAug05
Length: 332
Transcript: LIG3.eAug05
Intron
Length: 1400
Transcript: LIG3.eAug05
Length: 1400
Transcript: LIG3.eAug05
Exon
Length: 30
Transcript: LIG3.fAug05
Length: 30
Transcript: LIG3.fAug05
Exon
Length: 1263
Transcript: LIG3.fAug05
Length: 1263
Transcript: LIG3.fAug05
Exon
Length: 846
Transcript: LIG3.fAug05
Length: 846
Transcript: LIG3.fAug05
Exon
Length: 75
Transcript: LIG3.fAug05
Length: 75
Transcript: LIG3.fAug05
Exon
Length: 147
Transcript: LIG3.fAug05
Length: 147
Transcript: LIG3.fAug05
Exon
Length: 196
Transcript: LIG3.fAug05
Length: 196
Transcript: LIG3.fAug05
Exon
Length: 2975
Transcript: LIG3.fAug05
Length: 2975
Transcript: LIG3.fAug05
Intron
Length: 20226
Transcript: LIG3.fAug05
Length: 20226
Transcript: LIG3.fAug05
Intron
Length: 307
Transcript: LIG3.fAug05
Length: 307
Transcript: LIG3.fAug05
Intron
Length: 332
Transcript: LIG3.fAug05
Length: 332
Transcript: LIG3.fAug05
Intron
Length: 1400
Transcript: LIG3.fAug05
Length: 1400
Transcript: LIG3.fAug05
Intron
Length: 505
Transcript: LIG3.fAug05
Length: 505
Transcript: LIG3.fAug05
Intron
Length: 563
Transcript: LIG3.fAug05
Length: 563
Transcript: LIG3.fAug05
Exon
Length: 64
Transcript: LIG3.gAug05
Length: 64
Transcript: LIG3.gAug05
Exon
Length: 144
Transcript: LIG3.gAug05
Length: 144
Transcript: LIG3.gAug05
Exon
Length: 198
Transcript: LIG3.gAug05
Length: 198
Transcript: LIG3.gAug05
Exon
Length: 152
Transcript: LIG3.gAug05
Length: 152
Transcript: LIG3.gAug05
Exon
Length: 167
Transcript: LIG3.gAug05
Length: 167
Transcript: LIG3.gAug05
Exon
Length: 78
Transcript: LIG3.gAug05
Length: 78
Transcript: LIG3.gAug05
Exon
Length: 95
Transcript: LIG3.gAug05
Length: 95
Transcript: LIG3.gAug05
Intron
Length: 5365
Transcript: LIG3.gAug05
Length: 5365
Transcript: LIG3.gAug05
Intron
Length: 3334
Transcript: LIG3.gAug05
Length: 3334
Transcript: LIG3.gAug05
Intron
Length: 1299
Transcript: LIG3.gAug05
Length: 1299
Transcript: LIG3.gAug05
Intron
Length: 556
Transcript: LIG3.gAug05
Length: 556
Transcript: LIG3.gAug05
Intron
Length: 120
Transcript: LIG3.gAug05
Length: 120
Transcript: LIG3.gAug05
Intron
Length: 488
Transcript: LIG3.gAug05
Length: 488
Transcript: LIG3.gAug05
Exon
Length: 201
Transcript: LIG3.hAug05
Length: 201
Transcript: LIG3.hAug05
Exon
Length: 78
Transcript: LIG3.hAug05
Length: 78
Transcript: LIG3.hAug05
Exon
Length: 169
Transcript: LIG3.hAug05
Length: 169
Transcript: LIG3.hAug05
Exon
Length: 156
Transcript: LIG3.hAug05
Length: 156
Transcript: LIG3.hAug05
Exon
Length: 310
Transcript: LIG3.hAug05
Length: 310
Transcript: LIG3.hAug05
Intron
Length: 120
Transcript: LIG3.hAug05
Length: 120
Transcript: LIG3.hAug05
Intron
Length: 488
Transcript: LIG3.hAug05
Length: 488
Transcript: LIG3.hAug05
Intron
Length: 1583
Transcript: LIG3.hAug05
Length: 1583
Transcript: LIG3.hAug05
Intron
Length: 1632
Transcript: LIG3.hAug05
Length: 1632
Transcript: LIG3.hAug05
Exon
Length: 245
Transcript: LIG3.iAug05
Length: 245
Transcript: LIG3.iAug05
Exon
Length: 132
Transcript: LIG3.iAug05
Length: 132
Transcript: LIG3.iAug05
Exon
Length: 80
Transcript: LIG3.iAug05
Length: 80
Transcript: LIG3.iAug05
Exon
Length: 88
Transcript: LIG3.iAug05
Length: 88
Transcript: LIG3.iAug05
Exon
Length: 76
Transcript: LIG3.iAug05
Length: 76
Transcript: LIG3.iAug05
Intron
Length: 1632
Transcript: LIG3.iAug05
Length: 1632
Transcript: LIG3.iAug05
Intron
Length: 378
Transcript: LIG3.iAug05
Length: 378
Transcript: LIG3.iAug05
Intron
Length: 1084
Transcript: LIG3.iAug05
Length: 1084
Transcript: LIG3.iAug05
Intron
Length: 393
Transcript: LIG3.iAug05
Length: 393
Transcript: LIG3.iAug05
Exon
Length: 519
Transcript: LIG3.jAug05
Length: 519
Transcript: LIG3.jAug05
Exon
Length: 77
Transcript: LIG3.jAug05
Length: 77
Transcript: LIG3.jAug05
Exon
Length: 144
Transcript: LIG3.jAug05
Length: 144
Transcript: LIG3.jAug05
Exon
Length: 75
Transcript: LIG3.jAug05
Length: 75
Transcript: LIG3.jAug05
Intron
Length: 322
Transcript: LIG3.jAug05
Length: 322
Transcript: LIG3.jAug05
Intron
Length: 4430
Transcript: LIG3.jAug05
Length: 4430
Transcript: LIG3.jAug05
Intron
Length: 3334
Transcript: LIG3.jAug05
Length: 3334
Transcript: LIG3.jAug05
Exon
Length: 1169
Transcript: LIG3.kAug05
Length: 1169
Transcript: LIG3.kAug05
Exon
Length: 100
Transcript: LIG3.kAug05
Length: 100
Transcript: LIG3.kAug05
Intron
Length: 1099
Transcript: LIG3.kAug05
Length: 1099
Transcript: LIG3.kAug05
Exon
Length: 70
Transcript: LIG3.lAug05
Length: 70
Transcript: LIG3.lAug05
Exon
Length: 97
Transcript: LIG3.lAug05
Length: 97
Transcript: LIG3.lAug05
Exon
Length: 68
Transcript: LIG3.lAug05
Length: 68
Transcript: LIG3.lAug05
Intron
Length: 374
Transcript: LIG3.lAug05
Length: 374
Transcript: LIG3.lAug05
Intron
Length: 307
Transcript: LIG3.lAug05
Length: 307
Transcript: LIG3.lAug05
Exon
Length: 568
Transcript: LIG3.shed1.aAug05
Length: 568
Transcript: LIG3.shed1.aAug05
Exon
Length: 353
Transcript: LIG3.shed2.aAug05
Length: 353
Transcript: LIG3.shed2.aAug05
LIG3.u.f.1
CGGATTTAAAGAGACAGGCG
CGGATTTAAAGAGACAGGCG
LIG3.u.r.6
GTTGCTCAGCCATCTCACAG
GTTGCTCAGCCATCTCACAG