PNT2 siRNA validations - Rnomics 📊 Palace

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https://rnomics.med.usherbrooke.ca/palace?purl=/data/related/749/gene;rna_source/702719;5216

PNT2 siRNA validations ⚙

Transcript map : APH1B Carstens_siESRP

APH1B.E.1.F2 / APH1B.E.1.R2 (CM018571 C7) : Curve | Curve set
APH1B.E.1.F1 / APH1B.E.1.R1 (CM018571 C6) : Curve | Curve set

Exon
Length: 143
Transcript: APH1B.aApr07

Exon
Length: 171
Transcript: APH1B.aApr07

Exon
Length: 71
Transcript: APH1B.aApr07

Exon
Length: 123
Transcript: APH1B.aApr07

Exon
Length: 128
Transcript: APH1B.aApr07

Exon
Length: 163
Transcript: APH1B.aApr07

Intron
Length: 3000
Transcript: APH1B.aApr07

Intron
Length: 7226
Transcript: APH1B.aApr07

Intron
Length: 795
Transcript: APH1B.aApr07

Intron
Length: 14798
Transcript: APH1B.aApr07

Intron
Length: 3141
Transcript: APH1B.aApr07

Reaction
Expected peak: 268
24M
APH1B.E.1.F2
APH1B.E.1.R2

Reaction
Expected peak: 305
25.9M
APH1B.E.1.F1
APH1B.E.1.R1

Exon
Length: 217
Transcript: APH1B.bApr07

Exon
Length: 171
Transcript: APH1B.bApr07

Exon
Length: 71
Transcript: APH1B.bApr07

Exon
Length: 123
Transcript: APH1B.bApr07

Exon
Length: 128
Transcript: APH1B.bApr07

Exon
Length: 3513
Transcript: APH1B.bApr07

Intron
Length: 1424
Transcript: APH1B.bApr07

Intron
Length: 7226
Transcript: APH1B.bApr07

Intron
Length: 795
Transcript: APH1B.bApr07

Intron
Length: 14798
Transcript: APH1B.bApr07

Intron
Length: 3141
Transcript: APH1B.bApr07

Reaction
Expected peak: 268
24M
APH1B.E.1.F2
APH1B.E.1.R2

Reaction
Expected peak: 305
25.9M
APH1B.E.1.F1
APH1B.E.1.R1

Exon
Length: 119
Transcript: APH1B.cApr07

Exon
Length: 171
Transcript: APH1B.cApr07

Exon
Length: 71
Transcript: APH1B.cApr07

Exon
Length: 123
Transcript: APH1B.cApr07

Exon
Length: 203
Transcript: APH1B.cApr07

Intron
Length: 1424
Transcript: APH1B.cApr07

Intron
Length: 7226
Transcript: APH1B.cApr07

Intron
Length: 795
Transcript: APH1B.cApr07

Intron
Length: 18067
Transcript: APH1B.cApr07

Exon
Length: 131
Transcript: APH1B.dApr07

Exon
Length: 171
Transcript: APH1B.dApr07

Exon
Length: 71
Transcript: APH1B.dApr07

Exon
Length: 128
Transcript: APH1B.dApr07

Exon
Length: 380
Transcript: APH1B.dApr07

Intron
Length: 1424
Transcript: APH1B.dApr07

Intron
Length: 7226
Transcript: APH1B.dApr07

Intron
Length: 15716
Transcript: APH1B.dApr07

Intron
Length: 3141
Transcript: APH1B.dApr07

Reaction
Expected peak: 145
12.7M
APH1B.E.1.F2
APH1B.E.1.R2

Reaction
Expected peak: 182
12.4M
APH1B.E.1.F1
APH1B.E.1.R1

Exon
Length: 125
Transcript: APH1B.eApr07

Exon
Length: 64
Transcript: APH1B.eApr07

Exon
Length: 171
Transcript: APH1B.eApr07

Exon
Length: 71
Transcript: APH1B.eApr07

Exon
Length: 123
Transcript: APH1B.eApr07

Exon
Length: 128
Transcript: APH1B.eApr07

Exon
Length: 189
Transcript: APH1B.eApr07

Intron
Length: 554
Transcript: APH1B.eApr07

Intron
Length: 806
Transcript: APH1B.eApr07

Intron
Length: 7226
Transcript: APH1B.eApr07

Intron
Length: 795
Transcript: APH1B.eApr07

Intron
Length: 14798
Transcript: APH1B.eApr07

Intron
Length: 3141
Transcript: APH1B.eApr07

Reaction
Expected peak: 268
24M
APH1B.E.1.F2
APH1B.E.1.R2

Reaction
Expected peak: 305
25.9M
APH1B.E.1.F1
APH1B.E.1.R1

Exon
Length: 312
Transcript: APH1B.fApr07

Exon
Length: 128
Transcript: APH1B.fApr07

Exon
Length: 291
Transcript: APH1B.fApr07

Intron
Length: 10347
Transcript: APH1B.fApr07

Intron
Length: 3141
Transcript: APH1B.fApr07

Exon
Length: 366
Transcript: APH1B.gApr07

Exon
Length: 149
Transcript: APH1B.gApr07

Intron
Length: 14798
Transcript: APH1B.gApr07

Exon
Length: 246
Transcript: APH1B.hApr07

Exon
Length: 171
Transcript: APH1B.hApr07

Exon
Length: 71
Transcript: APH1B.hApr07

Exon
Length: 55
Transcript: APH1B.hApr07

Intron
Length: 1231
Transcript: APH1B.hApr07

Intron
Length: 7226
Transcript: APH1B.hApr07

Intron
Length: 795
Transcript: APH1B.hApr07

Exon
Length: 4799
Transcript: APH1B.iApr07-unspliced

Exon
Length: 245
Transcript: APH1B.jApr07

Exon
Length: 227
Transcript: APH1B.jApr07

Intron
Length: 363
Transcript: APH1B.jApr07

APH1B.E.1.F1
AGCCAGTGAAGGTTTGAAGAGT

APH1B.E.1.F2
GTGAGACAGCACCCTCTATGCG

APH1B.E.1.R2
TGGGTCAGGAGAACGATAAGGA

APH1B.E.1.R1
GCAGGTGGGTCAGGAGAACG