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LGFUS Public Data
Cancer-associated regulation of alternative splicing
05. Association Screen: Ovary
Transcript map
: AGTRAP
Exon
Length: 151
Transcript: NM_001040194
Length: 151
Transcript: NM_001040194
Exon
Length: 35
Transcript: NM_001040194
Length: 35
Transcript: NM_001040194
Exon
Length: 106
Transcript: NM_001040194
Length: 106
Transcript: NM_001040194
Exon
Length: 175
Transcript: NM_001040194
Length: 175
Transcript: NM_001040194
Exon
Length: 695
Transcript: NM_001040194
Length: 695
Transcript: NM_001040194
Intron
Length: 9567
Transcript: NM_001040194
Length: 9567
Transcript: NM_001040194
Intron
Length: 1602
Transcript: NM_001040194
Length: 1602
Transcript: NM_001040194
Intron
Length: 869
Transcript: NM_001040194
Length: 869
Transcript: NM_001040194
Intron
Length: 1487
Transcript: NM_001040194
Length: 1487
Transcript: NM_001040194
Reaction
Expected peak: 115
Associated peak: 119,122,123,124,125
Repeated 48 time
Molarity: 19.61M
Forward: refseq_AGTRAP.F1
Reverse: refseq_AGTRAP.R1
Expected peak: 115
Associated peak: 119,122,123,124,125
Repeated 48 time
Molarity: 19.61M
Forward: refseq_AGTRAP.F1
Reverse: refseq_AGTRAP.R1
Exon
Length: 151
Transcript: NM_001040195
Length: 151
Transcript: NM_001040195
Exon
Length: 106
Transcript: NM_001040195
Length: 106
Transcript: NM_001040195
Exon
Length: 175
Transcript: NM_001040195
Length: 175
Transcript: NM_001040195
Exon
Length: 695
Transcript: NM_001040195
Length: 695
Transcript: NM_001040195
Intron
Length: 11204
Transcript: NM_001040195
Length: 11204
Transcript: NM_001040195
Intron
Length: 869
Transcript: NM_001040195
Length: 869
Transcript: NM_001040195
Intron
Length: 1487
Transcript: NM_001040195
Length: 1487
Transcript: NM_001040195
Reaction
Expected peak: 115
Associated peak: 119,122,123,124,125
Repeated 48 time
Molarity: 19.61M
Forward: refseq_AGTRAP.F1
Reverse: refseq_AGTRAP.R1
Expected peak: 115
Associated peak: 119,122,123,124,125
Repeated 48 time
Molarity: 19.61M
Forward: refseq_AGTRAP.F1
Reverse: refseq_AGTRAP.R1
Exon
Length: 151
Transcript: NM_001040196
Length: 151
Transcript: NM_001040196
Exon
Length: 35
Transcript: NM_001040196
Length: 35
Transcript: NM_001040196
Exon
Length: 97
Transcript: NM_001040196
Length: 97
Transcript: NM_001040196
Exon
Length: 106
Transcript: NM_001040196
Length: 106
Transcript: NM_001040196
Exon
Length: 175
Transcript: NM_001040196
Length: 175
Transcript: NM_001040196
Exon
Length: 695
Transcript: NM_001040196
Length: 695
Transcript: NM_001040196
Intron
Length: 9567
Transcript: NM_001040196
Length: 9567
Transcript: NM_001040196
Intron
Length: 289
Transcript: NM_001040196
Length: 289
Transcript: NM_001040196
Intron
Length: 1216
Transcript: NM_001040196
Length: 1216
Transcript: NM_001040196
Intron
Length: 869
Transcript: NM_001040196
Length: 869
Transcript: NM_001040196
Intron
Length: 1487
Transcript: NM_001040196
Length: 1487
Transcript: NM_001040196
Reaction
Expected peak: 115
Associated peak: 119,122,123,124,125
Repeated 48 time
Molarity: 19.61M
Forward: refseq_AGTRAP.F1
Reverse: refseq_AGTRAP.R1
Expected peak: 115
Associated peak: 119,122,123,124,125
Repeated 48 time
Molarity: 19.61M
Forward: refseq_AGTRAP.F1
Reverse: refseq_AGTRAP.R1
Exon
Length: 151
Transcript: NM_001040197
Length: 151
Transcript: NM_001040197
Exon
Length: 35
Transcript: NM_001040197
Length: 35
Transcript: NM_001040197
Exon
Length: 97
Transcript: NM_001040197
Length: 97
Transcript: NM_001040197
Exon
Length: 106
Transcript: NM_001040197
Length: 106
Transcript: NM_001040197
Exon
Length: 196
Transcript: NM_001040197
Length: 196
Transcript: NM_001040197
Exon
Length: 695
Transcript: NM_001040197
Length: 695
Transcript: NM_001040197
Intron
Length: 9567
Transcript: NM_001040197
Length: 9567
Transcript: NM_001040197
Intron
Length: 289
Transcript: NM_001040197
Length: 289
Transcript: NM_001040197
Intron
Length: 1216
Transcript: NM_001040197
Length: 1216
Transcript: NM_001040197
Intron
Length: 869
Transcript: NM_001040197
Length: 869
Transcript: NM_001040197
Intron
Length: 1466
Transcript: NM_001040197
Length: 1466
Transcript: NM_001040197
Reaction
Expected peak: 136
Associated peak: 142,144,145,146,147,148,149
Repeated 48 time
Molarity: 20.39M
Forward: refseq_AGTRAP.F1
Reverse: refseq_AGTRAP.R1
Expected peak: 136
Associated peak: 142,144,145,146,147,148,149
Repeated 48 time
Molarity: 20.39M
Forward: refseq_AGTRAP.F1
Reverse: refseq_AGTRAP.R1
Exon
Length: 151
Transcript: NM_020350
Length: 151
Transcript: NM_020350
Exon
Length: 35
Transcript: NM_020350
Length: 35
Transcript: NM_020350
Exon
Length: 106
Transcript: NM_020350
Length: 106
Transcript: NM_020350
Exon
Length: 196
Transcript: NM_020350
Length: 196
Transcript: NM_020350
Exon
Length: 695
Transcript: NM_020350
Length: 695
Transcript: NM_020350
Intron
Length: 9567
Transcript: NM_020350
Length: 9567
Transcript: NM_020350
Intron
Length: 1602
Transcript: NM_020350
Length: 1602
Transcript: NM_020350
Intron
Length: 869
Transcript: NM_020350
Length: 869
Transcript: NM_020350
Intron
Length: 1466
Transcript: NM_020350
Length: 1466
Transcript: NM_020350
Reaction
Expected peak: 136
Associated peak: 142,144,145,146,147,148,149
Repeated 48 time
Molarity: 20.39M
Forward: refseq_AGTRAP.F1
Reverse: refseq_AGTRAP.R1
Expected peak: 136
Associated peak: 142,144,145,146,147,148,149
Repeated 48 time
Molarity: 20.39M
Forward: refseq_AGTRAP.F1
Reverse: refseq_AGTRAP.R1
refseq_AGTRAP.R1
GGACTGCAAAGGGATCTGC
GGACTGCAAAGGGATCTGC
refseq_AGTRAP.F1
TGCTTCGTCTACCACATGTACC
TGCTTCGTCTACCACATGTACC