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LGFUS Public Data
Cancer-associated regulation of alternative splicing
05. Association Screen: Ovary
Transcript map
: ADARB1
Exon
Length: 194
Transcript: NM_001033049
Length: 194
Transcript: NM_001033049
Exon
Length: 172
Transcript: NM_001033049
Length: 172
Transcript: NM_001033049
Exon
Length: 118
Transcript: NM_001033049
Length: 118
Transcript: NM_001033049
Exon
Length: 75
Transcript: NM_001033049
Length: 75
Transcript: NM_001033049
Exon
Length: 935
Transcript: NM_001033049
Length: 935
Transcript: NM_001033049
Exon
Length: 115
Transcript: NM_001033049
Length: 115
Transcript: NM_001033049
Exon
Length: 169
Transcript: NM_001033049
Length: 169
Transcript: NM_001033049
Exon
Length: 149
Transcript: NM_001033049
Length: 149
Transcript: NM_001033049
Exon
Length: 169
Transcript: NM_001033049
Length: 169
Transcript: NM_001033049
Exon
Length: 182
Transcript: NM_001033049
Length: 182
Transcript: NM_001033049
Exon
Length: 179
Transcript: NM_001033049
Length: 179
Transcript: NM_001033049
Exon
Length: 1560
Transcript: NM_001033049
Length: 1560
Transcript: NM_001033049
Exon
Length: 1013
Transcript: NM_001033049
Length: 1013
Transcript: NM_001033049
Intron
Length: 53608
Transcript: NM_001033049
Length: 53608
Transcript: NM_001033049
Intron
Length: 6141
Transcript: NM_001033049
Length: 6141
Transcript: NM_001033049
Intron
Length: 36777
Transcript: NM_001033049
Length: 36777
Transcript: NM_001033049
Intron
Length: 4045
Transcript: NM_001033049
Length: 4045
Transcript: NM_001033049
Intron
Length: 3665
Transcript: NM_001033049
Length: 3665
Transcript: NM_001033049
Intron
Length: 2140
Transcript: NM_001033049
Length: 2140
Transcript: NM_001033049
Intron
Length: 608
Transcript: NM_001033049
Length: 608
Transcript: NM_001033049
Intron
Length: 1412
Transcript: NM_001033049
Length: 1412
Transcript: NM_001033049
Intron
Length: 19463
Transcript: NM_001033049
Length: 19463
Transcript: NM_001033049
Intron
Length: 16099
Transcript: NM_001033049
Length: 16099
Transcript: NM_001033049
Intron
Length: 1003
Transcript: NM_001033049
Length: 1003
Transcript: NM_001033049
Intron
Length: 1969
Transcript: NM_001033049
Length: 1969
Transcript: NM_001033049
Reaction
Expected peak: 112
Associated peak: 122,124,125,126,127,128
Repeated 48 time
Molarity: 12.86M
Forward: refseq_ADARB1.F2
Reverse: refseq_ADARB1.R2
Expected peak: 112
Associated peak: 122,124,125,126,127,128
Repeated 48 time
Molarity: 12.86M
Forward: refseq_ADARB1.F2
Reverse: refseq_ADARB1.R2
Reaction
Expected peak: 298
Associated peak: 292,293,294,295,296,297,298
Repeated 48 time
Molarity: 7.73M
Forward: refseq_ADARB1.F4
Reverse: refseq_ADARB1.R4
Expected peak: 298
Associated peak: 292,293,294,295,296,297,298
Repeated 48 time
Molarity: 7.73M
Forward: refseq_ADARB1.F4
Reverse: refseq_ADARB1.R4
Exon
Length: 194
Transcript: NM_001112
Length: 194
Transcript: NM_001112
Exon
Length: 172
Transcript: NM_001112
Length: 172
Transcript: NM_001112
Exon
Length: 75
Transcript: NM_001112
Length: 75
Transcript: NM_001112
Exon
Length: 935
Transcript: NM_001112
Length: 935
Transcript: NM_001112
Exon
Length: 115
Transcript: NM_001112
Length: 115
Transcript: NM_001112
Exon
Length: 169
Transcript: NM_001112
Length: 169
Transcript: NM_001112
Exon
Length: 149
Transcript: NM_001112
Length: 149
Transcript: NM_001112
Exon
Length: 169
Transcript: NM_001112
Length: 169
Transcript: NM_001112
Exon
Length: 182
Transcript: NM_001112
Length: 182
Transcript: NM_001112
Exon
Length: 179
Transcript: NM_001112
Length: 179
Transcript: NM_001112
Exon
Length: 4542
Transcript: NM_001112
Length: 4542
Transcript: NM_001112
Intron
Length: 53608
Transcript: NM_001112
Length: 53608
Transcript: NM_001112
Intron
Length: 43036
Transcript: NM_001112
Length: 43036
Transcript: NM_001112
Intron
Length: 4045
Transcript: NM_001112
Length: 4045
Transcript: NM_001112
Intron
Length: 3665
Transcript: NM_001112
Length: 3665
Transcript: NM_001112
Intron
Length: 2140
Transcript: NM_001112
Length: 2140
Transcript: NM_001112
Intron
Length: 608
Transcript: NM_001112
Length: 608
Transcript: NM_001112
Intron
Length: 1412
Transcript: NM_001112
Length: 1412
Transcript: NM_001112
Intron
Length: 19463
Transcript: NM_001112
Length: 19463
Transcript: NM_001112
Intron
Length: 16099
Transcript: NM_001112
Length: 16099
Transcript: NM_001112
Intron
Length: 1003
Transcript: NM_001112
Length: 1003
Transcript: NM_001112
Reaction
Expected peak: 112
Associated peak: 122,124,125,126,127,128
Repeated 48 time
Molarity: 12.86M
Forward: refseq_ADARB1.F2
Reverse: refseq_ADARB1.R2
Expected peak: 112
Associated peak: 122,124,125,126,127,128
Repeated 48 time
Molarity: 12.86M
Forward: refseq_ADARB1.F2
Reverse: refseq_ADARB1.R2
Reaction
Expected peak: 180
Associated peak: 189,190,191,192
Repeated 48 time
Molarity: 22.48M
Forward: refseq_ADARB1.F4
Reverse: refseq_ADARB1.R4
Expected peak: 180
Associated peak: 189,190,191,192
Repeated 48 time
Molarity: 22.48M
Forward: refseq_ADARB1.F4
Reverse: refseq_ADARB1.R4
Exon
Length: 194
Transcript: NM_015833
Length: 194
Transcript: NM_015833
Exon
Length: 172
Transcript: NM_015833
Length: 172
Transcript: NM_015833
Exon
Length: 75
Transcript: NM_015833
Length: 75
Transcript: NM_015833
Exon
Length: 935
Transcript: NM_015833
Length: 935
Transcript: NM_015833
Exon
Length: 115
Transcript: NM_015833
Length: 115
Transcript: NM_015833
Exon
Length: 169
Transcript: NM_015833
Length: 169
Transcript: NM_015833
Exon
Length: 149
Transcript: NM_015833
Length: 149
Transcript: NM_015833
Exon
Length: 120
Transcript: NM_015833
Length: 120
Transcript: NM_015833
Exon
Length: 169
Transcript: NM_015833
Length: 169
Transcript: NM_015833
Exon
Length: 182
Transcript: NM_015833
Length: 182
Transcript: NM_015833
Exon
Length: 179
Transcript: NM_015833
Length: 179
Transcript: NM_015833
Exon
Length: 1560
Transcript: NM_015833
Length: 1560
Transcript: NM_015833
Exon
Length: 1013
Transcript: NM_015833
Length: 1013
Transcript: NM_015833
Intron
Length: 53608
Transcript: NM_015833
Length: 53608
Transcript: NM_015833
Intron
Length: 43036
Transcript: NM_015833
Length: 43036
Transcript: NM_015833
Intron
Length: 4045
Transcript: NM_015833
Length: 4045
Transcript: NM_015833
Intron
Length: 3665
Transcript: NM_015833
Length: 3665
Transcript: NM_015833
Intron
Length: 2140
Transcript: NM_015833
Length: 2140
Transcript: NM_015833
Intron
Length: 608
Transcript: NM_015833
Length: 608
Transcript: NM_015833
Intron
Length: 963
Transcript: NM_015833
Length: 963
Transcript: NM_015833
Intron
Length: 329
Transcript: NM_015833
Length: 329
Transcript: NM_015833
Intron
Length: 19463
Transcript: NM_015833
Length: 19463
Transcript: NM_015833
Intron
Length: 16099
Transcript: NM_015833
Length: 16099
Transcript: NM_015833
Intron
Length: 1003
Transcript: NM_015833
Length: 1003
Transcript: NM_015833
Intron
Length: 1969
Transcript: NM_015833
Length: 1969
Transcript: NM_015833
Reaction
Expected peak: 180
Associated peak: 189,190,191,192
Repeated 48 time
Molarity: 22.48M
Forward: refseq_ADARB1.F4
Reverse: refseq_ADARB1.R4
Expected peak: 180
Associated peak: 189,190,191,192
Repeated 48 time
Molarity: 22.48M
Forward: refseq_ADARB1.F4
Reverse: refseq_ADARB1.R4
Reaction
Expected peak: 232
Associated peak: 244,245,246,247,248,249
Repeated 48 time
Molarity: 14.31M
Forward: refseq_ADARB1.F2
Reverse: refseq_ADARB1.R2
Expected peak: 232
Associated peak: 244,245,246,247,248,249
Repeated 48 time
Molarity: 14.31M
Forward: refseq_ADARB1.F2
Reverse: refseq_ADARB1.R2
Exon
Length: 194
Transcript: NM_015834
Length: 194
Transcript: NM_015834
Exon
Length: 172
Transcript: NM_015834
Length: 172
Transcript: NM_015834
Exon
Length: 75
Transcript: NM_015834
Length: 75
Transcript: NM_015834
Exon
Length: 935
Transcript: NM_015834
Length: 935
Transcript: NM_015834
Exon
Length: 115
Transcript: NM_015834
Length: 115
Transcript: NM_015834
Exon
Length: 169
Transcript: NM_015834
Length: 169
Transcript: NM_015834
Exon
Length: 149
Transcript: NM_015834
Length: 149
Transcript: NM_015834
Exon
Length: 120
Transcript: NM_015834
Length: 120
Transcript: NM_015834
Exon
Length: 169
Transcript: NM_015834
Length: 169
Transcript: NM_015834
Exon
Length: 182
Transcript: NM_015834
Length: 182
Transcript: NM_015834
Exon
Length: 179
Transcript: NM_015834
Length: 179
Transcript: NM_015834
Exon
Length: 90
Transcript: NM_015834
Length: 90
Transcript: NM_015834
Exon
Length: 1013
Transcript: NM_015834
Length: 1013
Transcript: NM_015834
Intron
Length: 53608
Transcript: NM_015834
Length: 53608
Transcript: NM_015834
Intron
Length: 43036
Transcript: NM_015834
Length: 43036
Transcript: NM_015834
Intron
Length: 4045
Transcript: NM_015834
Length: 4045
Transcript: NM_015834
Intron
Length: 3665
Transcript: NM_015834
Length: 3665
Transcript: NM_015834
Intron
Length: 2140
Transcript: NM_015834
Length: 2140
Transcript: NM_015834
Intron
Length: 608
Transcript: NM_015834
Length: 608
Transcript: NM_015834
Intron
Length: 963
Transcript: NM_015834
Length: 963
Transcript: NM_015834
Intron
Length: 329
Transcript: NM_015834
Length: 329
Transcript: NM_015834
Intron
Length: 19463
Transcript: NM_015834
Length: 19463
Transcript: NM_015834
Intron
Length: 16099
Transcript: NM_015834
Length: 16099
Transcript: NM_015834
Intron
Length: 1003
Transcript: NM_015834
Length: 1003
Transcript: NM_015834
Intron
Length: 3439
Transcript: NM_015834
Length: 3439
Transcript: NM_015834
Reaction
Expected peak: 180
Associated peak: 189,190,191,192
Repeated 48 time
Molarity: 22.48M
Forward: refseq_ADARB1.F4
Reverse: refseq_ADARB1.R4
Expected peak: 180
Associated peak: 189,190,191,192
Repeated 48 time
Molarity: 22.48M
Forward: refseq_ADARB1.F4
Reverse: refseq_ADARB1.R4
Reaction
Expected peak: 232
Associated peak: 244,245,246,247,248,249
Repeated 48 time
Molarity: 14.31M
Forward: refseq_ADARB1.F2
Reverse: refseq_ADARB1.R2
Expected peak: 232
Associated peak: 244,245,246,247,248,249
Repeated 48 time
Molarity: 14.31M
Forward: refseq_ADARB1.F2
Reverse: refseq_ADARB1.R2
refseq_ADARB1.F2
ACATGAGCCAATCCTGGAAG
ACATGAGCCAATCCTGGAAG
refseq_ADARB1.R2
ATTGGAGCGCACTGGAATC
ATTGGAGCGCACTGGAATC
refseq_ADARB1.F4
CTGGCATGGAGAGCTTAAGG
CTGGCATGGAGAGCTTAAGG
refseq_ADARB1.R4
TTGACTGGCGGAGACTGTTT
TTGACTGGCGGAGACTGTTT