Back to Rnomics Platform
Open Session
×
1 warning:
- Access restricted to public data.
Please sign in at Rnomics Platform to access your data.
Home
Supplementary data
RBFOX2 enforces the mesenchymal splicing signature in normal and cancer tissues
7. 26 switch-like targets from epithelium and mesenchyme (fetal colon) in RBFOX2, MBNL1, PTBP and ESRP knockdowns
Transcript map
: MAP3K7 Control (MDA-MB-231)
Exon
Length: 882
Transcript: AK055901
Length: 882
Transcript: AK055901
Exon
Length: 106
Transcript: AK055901
Length: 106
Transcript: AK055901
Exon
Length: 62
Transcript: AK055901
Length: 62
Transcript: AK055901
Exon
Length: 116
Transcript: AK055901
Length: 116
Transcript: AK055901
Exon
Length: 1048
Transcript: AK055901
Length: 1048
Transcript: AK055901
Intron
Length: 12553
Transcript: AK055901
Length: 12553
Transcript: AK055901
Intron
Length: 4358
Transcript: AK055901
Length: 4358
Transcript: AK055901
Intron
Length: 695
Transcript: AK055901
Length: 695
Transcript: AK055901
Intron
Length: 1765
Transcript: AK055901
Length: 1765
Transcript: AK055901
Exon
Length: 425
Transcript: NM_003188
Length: 425
Transcript: NM_003188
Exon
Length: 111
Transcript: NM_003188
Length: 111
Transcript: NM_003188
Exon
Length: 66
Transcript: NM_003188
Length: 66
Transcript: NM_003188
Exon
Length: 46
Transcript: NM_003188
Length: 46
Transcript: NM_003188
Exon
Length: 139
Transcript: NM_003188
Length: 139
Transcript: NM_003188
Exon
Length: 125
Transcript: NM_003188
Length: 125
Transcript: NM_003188
Exon
Length: 129
Transcript: NM_003188
Length: 129
Transcript: NM_003188
Exon
Length: 131
Transcript: NM_003188
Length: 131
Transcript: NM_003188
Exon
Length: 82
Transcript: NM_003188
Length: 82
Transcript: NM_003188
Exon
Length: 131
Transcript: NM_003188
Length: 131
Transcript: NM_003188
Exon
Length: 130
Transcript: NM_003188
Length: 130
Transcript: NM_003188
Exon
Length: 65
Transcript: NM_003188
Length: 65
Transcript: NM_003188
Exon
Length: 106
Transcript: NM_003188
Length: 106
Transcript: NM_003188
Exon
Length: 62
Transcript: NM_003188
Length: 62
Transcript: NM_003188
Exon
Length: 116
Transcript: NM_003188
Length: 116
Transcript: NM_003188
Exon
Length: 1048
Transcript: NM_003188
Length: 1048
Transcript: NM_003188
Intron
Length: 14956
Transcript: NM_003188
Length: 14956
Transcript: NM_003188
Intron
Length: 3073
Transcript: NM_003188
Length: 3073
Transcript: NM_003188
Intron
Length: 6890
Transcript: NM_003188
Length: 6890
Transcript: NM_003188
Intron
Length: 1407
Transcript: NM_003188
Length: 1407
Transcript: NM_003188
Intron
Length: 3451
Transcript: NM_003188
Length: 3451
Transcript: NM_003188
Intron
Length: 2913
Transcript: NM_003188
Length: 2913
Transcript: NM_003188
Intron
Length: 1278
Transcript: NM_003188
Length: 1278
Transcript: NM_003188
Intron
Length: 1499
Transcript: NM_003188
Length: 1499
Transcript: NM_003188
Intron
Length: 2290
Transcript: NM_003188
Length: 2290
Transcript: NM_003188
Intron
Length: 659
Transcript: NM_003188
Length: 659
Transcript: NM_003188
Intron
Length: 10856
Transcript: NM_003188
Length: 10856
Transcript: NM_003188
Intron
Length: 12553
Transcript: NM_003188
Length: 12553
Transcript: NM_003188
Intron
Length: 4358
Transcript: NM_003188
Length: 4358
Transcript: NM_003188
Intron
Length: 695
Transcript: NM_003188
Length: 695
Transcript: NM_003188
Intron
Length: 1765
Transcript: NM_003188
Length: 1765
Transcript: NM_003188
Reaction
Expected peak: 152
108.5M
refseq_MAP3K7.F3
refseq_MAP3K7.R3
Expected peak: 152
108.5M
refseq_MAP3K7.F3
refseq_MAP3K7.R3
Exon
Length: 425
Transcript: NM_145331
Length: 425
Transcript: NM_145331
Exon
Length: 111
Transcript: NM_145331
Length: 111
Transcript: NM_145331
Exon
Length: 66
Transcript: NM_145331
Length: 66
Transcript: NM_145331
Exon
Length: 46
Transcript: NM_145331
Length: 46
Transcript: NM_145331
Exon
Length: 139
Transcript: NM_145331
Length: 139
Transcript: NM_145331
Exon
Length: 125
Transcript: NM_145331
Length: 125
Transcript: NM_145331
Exon
Length: 129
Transcript: NM_145331
Length: 129
Transcript: NM_145331
Exon
Length: 131
Transcript: NM_145331
Length: 131
Transcript: NM_145331
Exon
Length: 82
Transcript: NM_145331
Length: 82
Transcript: NM_145331
Exon
Length: 131
Transcript: NM_145331
Length: 131
Transcript: NM_145331
Exon
Length: 130
Transcript: NM_145331
Length: 130
Transcript: NM_145331
Exon
Length: 81
Transcript: NM_145331
Length: 81
Transcript: NM_145331
Exon
Length: 65
Transcript: NM_145331
Length: 65
Transcript: NM_145331
Exon
Length: 106
Transcript: NM_145331
Length: 106
Transcript: NM_145331
Exon
Length: 62
Transcript: NM_145331
Length: 62
Transcript: NM_145331
Exon
Length: 116
Transcript: NM_145331
Length: 116
Transcript: NM_145331
Exon
Length: 1048
Transcript: NM_145331
Length: 1048
Transcript: NM_145331
Intron
Length: 14956
Transcript: NM_145331
Length: 14956
Transcript: NM_145331
Intron
Length: 3073
Transcript: NM_145331
Length: 3073
Transcript: NM_145331
Intron
Length: 6890
Transcript: NM_145331
Length: 6890
Transcript: NM_145331
Intron
Length: 1407
Transcript: NM_145331
Length: 1407
Transcript: NM_145331
Intron
Length: 3451
Transcript: NM_145331
Length: 3451
Transcript: NM_145331
Intron
Length: 2913
Transcript: NM_145331
Length: 2913
Transcript: NM_145331
Intron
Length: 1278
Transcript: NM_145331
Length: 1278
Transcript: NM_145331
Intron
Length: 1499
Transcript: NM_145331
Length: 1499
Transcript: NM_145331
Intron
Length: 2290
Transcript: NM_145331
Length: 2290
Transcript: NM_145331
Intron
Length: 659
Transcript: NM_145331
Length: 659
Transcript: NM_145331
Intron
Length: 2625
Transcript: NM_145331
Length: 2625
Transcript: NM_145331
Intron
Length: 8150
Transcript: NM_145331
Length: 8150
Transcript: NM_145331
Intron
Length: 12553
Transcript: NM_145331
Length: 12553
Transcript: NM_145331
Intron
Length: 4358
Transcript: NM_145331
Length: 4358
Transcript: NM_145331
Intron
Length: 695
Transcript: NM_145331
Length: 695
Transcript: NM_145331
Intron
Length: 1765
Transcript: NM_145331
Length: 1765
Transcript: NM_145331
Reaction
Expected peak: 233
3.2M
refseq_MAP3K7.F3
refseq_MAP3K7.R3
Expected peak: 233
3.2M
refseq_MAP3K7.F3
refseq_MAP3K7.R3
Exon
Length: 425
Transcript: NM_145332
Length: 425
Transcript: NM_145332
Exon
Length: 111
Transcript: NM_145332
Length: 111
Transcript: NM_145332
Exon
Length: 66
Transcript: NM_145332
Length: 66
Transcript: NM_145332
Exon
Length: 46
Transcript: NM_145332
Length: 46
Transcript: NM_145332
Exon
Length: 139
Transcript: NM_145332
Length: 139
Transcript: NM_145332
Exon
Length: 125
Transcript: NM_145332
Length: 125
Transcript: NM_145332
Exon
Length: 129
Transcript: NM_145332
Length: 129
Transcript: NM_145332
Exon
Length: 131
Transcript: NM_145332
Length: 131
Transcript: NM_145332
Exon
Length: 82
Transcript: NM_145332
Length: 82
Transcript: NM_145332
Exon
Length: 131
Transcript: NM_145332
Length: 131
Transcript: NM_145332
Exon
Length: 130
Transcript: NM_145332
Length: 130
Transcript: NM_145332
Exon
Length: 81
Transcript: NM_145332
Length: 81
Transcript: NM_145332
Exon
Length: 65
Transcript: NM_145332
Length: 65
Transcript: NM_145332
Exon
Length: 106
Transcript: NM_145332
Length: 106
Transcript: NM_145332
Exon
Length: 62
Transcript: NM_145332
Length: 62
Transcript: NM_145332
Exon
Length: 1048
Transcript: NM_145332
Length: 1048
Transcript: NM_145332
Intron
Length: 14956
Transcript: NM_145332
Length: 14956
Transcript: NM_145332
Intron
Length: 3073
Transcript: NM_145332
Length: 3073
Transcript: NM_145332
Intron
Length: 6890
Transcript: NM_145332
Length: 6890
Transcript: NM_145332
Intron
Length: 1407
Transcript: NM_145332
Length: 1407
Transcript: NM_145332
Intron
Length: 3451
Transcript: NM_145332
Length: 3451
Transcript: NM_145332
Intron
Length: 2913
Transcript: NM_145332
Length: 2913
Transcript: NM_145332
Intron
Length: 1278
Transcript: NM_145332
Length: 1278
Transcript: NM_145332
Intron
Length: 1499
Transcript: NM_145332
Length: 1499
Transcript: NM_145332
Intron
Length: 2290
Transcript: NM_145332
Length: 2290
Transcript: NM_145332
Intron
Length: 659
Transcript: NM_145332
Length: 659
Transcript: NM_145332
Intron
Length: 2625
Transcript: NM_145332
Length: 2625
Transcript: NM_145332
Intron
Length: 8150
Transcript: NM_145332
Length: 8150
Transcript: NM_145332
Intron
Length: 12553
Transcript: NM_145332
Length: 12553
Transcript: NM_145332
Intron
Length: 4358
Transcript: NM_145332
Length: 4358
Transcript: NM_145332
Intron
Length: 2576
Transcript: NM_145332
Length: 2576
Transcript: NM_145332
Reaction
Expected peak: 233
3.2M
refseq_MAP3K7.F3
refseq_MAP3K7.R3
Expected peak: 233
3.2M
refseq_MAP3K7.F3
refseq_MAP3K7.R3
Exon
Length: 425
Transcript: NM_145333
Length: 425
Transcript: NM_145333
Exon
Length: 111
Transcript: NM_145333
Length: 111
Transcript: NM_145333
Exon
Length: 66
Transcript: NM_145333
Length: 66
Transcript: NM_145333
Exon
Length: 46
Transcript: NM_145333
Length: 46
Transcript: NM_145333
Exon
Length: 139
Transcript: NM_145333
Length: 139
Transcript: NM_145333
Exon
Length: 125
Transcript: NM_145333
Length: 125
Transcript: NM_145333
Exon
Length: 129
Transcript: NM_145333
Length: 129
Transcript: NM_145333
Exon
Length: 131
Transcript: NM_145333
Length: 131
Transcript: NM_145333
Exon
Length: 82
Transcript: NM_145333
Length: 82
Transcript: NM_145333
Exon
Length: 131
Transcript: NM_145333
Length: 131
Transcript: NM_145333
Exon
Length: 130
Transcript: NM_145333
Length: 130
Transcript: NM_145333
Exon
Length: 65
Transcript: NM_145333
Length: 65
Transcript: NM_145333
Exon
Length: 106
Transcript: NM_145333
Length: 106
Transcript: NM_145333
Exon
Length: 62
Transcript: NM_145333
Length: 62
Transcript: NM_145333
Exon
Length: 1048
Transcript: NM_145333
Length: 1048
Transcript: NM_145333
Intron
Length: 14956
Transcript: NM_145333
Length: 14956
Transcript: NM_145333
Intron
Length: 3073
Transcript: NM_145333
Length: 3073
Transcript: NM_145333
Intron
Length: 6890
Transcript: NM_145333
Length: 6890
Transcript: NM_145333
Intron
Length: 1407
Transcript: NM_145333
Length: 1407
Transcript: NM_145333
Intron
Length: 3451
Transcript: NM_145333
Length: 3451
Transcript: NM_145333
Intron
Length: 2913
Transcript: NM_145333
Length: 2913
Transcript: NM_145333
Intron
Length: 1278
Transcript: NM_145333
Length: 1278
Transcript: NM_145333
Intron
Length: 1499
Transcript: NM_145333
Length: 1499
Transcript: NM_145333
Intron
Length: 2290
Transcript: NM_145333
Length: 2290
Transcript: NM_145333
Intron
Length: 659
Transcript: NM_145333
Length: 659
Transcript: NM_145333
Intron
Length: 10856
Transcript: NM_145333
Length: 10856
Transcript: NM_145333
Intron
Length: 12553
Transcript: NM_145333
Length: 12553
Transcript: NM_145333
Intron
Length: 4358
Transcript: NM_145333
Length: 4358
Transcript: NM_145333
Intron
Length: 2576
Transcript: NM_145333
Length: 2576
Transcript: NM_145333
Reaction
Expected peak: 152
108.5M
refseq_MAP3K7.F3
refseq_MAP3K7.R3
Expected peak: 152
108.5M
refseq_MAP3K7.F3
refseq_MAP3K7.R3
refseq_MAP3K7.F3
ACGTTTAAGCTTGGGAGCCT
ACGTTTAAGCTTGGGAGCCT
refseq_MAP3K7.R3
CTTGGATGGATCTACGTCTTGG
CTTGGATGGATCTACGTCTTGG