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Supplementary data
RBFOX2 enforces the mesenchymal splicing signature in normal and cancer tissues
7. 26 switch-like targets from epithelium and mesenchyme (fetal colon) in RBFOX2, MBNL1, PTBP and ESRP knockdowns
Transcript map
: ENAH Control (MDA-MB-231)
Exon
Length: 458
Transcript: NM_001008493
Length: 458
Transcript: NM_001008493
Exon
Length: 166
Transcript: NM_001008493
Length: 166
Transcript: NM_001008493
Exon
Length: 178
Transcript: NM_001008493
Length: 178
Transcript: NM_001008493
Exon
Length: 85
Transcript: NM_001008493
Length: 85
Transcript: NM_001008493
Exon
Length: 368
Transcript: NM_001008493
Length: 368
Transcript: NM_001008493
Exon
Length: 111
Transcript: NM_001008493
Length: 111
Transcript: NM_001008493
Exon
Length: 305
Transcript: NM_001008493
Length: 305
Transcript: NM_001008493
Exon
Length: 146
Transcript: NM_001008493
Length: 146
Transcript: NM_001008493
Exon
Length: 58
Transcript: NM_001008493
Length: 58
Transcript: NM_001008493
Exon
Length: 49
Transcript: NM_001008493
Length: 49
Transcript: NM_001008493
Exon
Length: 67
Transcript: NM_001008493
Length: 67
Transcript: NM_001008493
Exon
Length: 63
Transcript: NM_001008493
Length: 63
Transcript: NM_001008493
Exon
Length: 79
Transcript: NM_001008493
Length: 79
Transcript: NM_001008493
Exon
Length: 58
Transcript: NM_001008493
Length: 58
Transcript: NM_001008493
Exon
Length: 10981
Transcript: NM_001008493
Length: 10981
Transcript: NM_001008493
Intron
Length: 85271
Transcript: NM_001008493
Length: 85271
Transcript: NM_001008493
Intron
Length: 12165
Transcript: NM_001008493
Length: 12165
Transcript: NM_001008493
Intron
Length: 24267
Transcript: NM_001008493
Length: 24267
Transcript: NM_001008493
Intron
Length: 10988
Transcript: NM_001008493
Length: 10988
Transcript: NM_001008493
Intron
Length: 1891
Transcript: NM_001008493
Length: 1891
Transcript: NM_001008493
Intron
Length: 2295
Transcript: NM_001008493
Length: 2295
Transcript: NM_001008493
Intron
Length: 1579
Transcript: NM_001008493
Length: 1579
Transcript: NM_001008493
Intron
Length: 156
Transcript: NM_001008493
Length: 156
Transcript: NM_001008493
Intron
Length: 797
Transcript: NM_001008493
Length: 797
Transcript: NM_001008493
Intron
Length: 3793
Transcript: NM_001008493
Length: 3793
Transcript: NM_001008493
Intron
Length: 2897
Transcript: NM_001008493
Length: 2897
Transcript: NM_001008493
Intron
Length: 3920
Transcript: NM_001008493
Length: 3920
Transcript: NM_001008493
Intron
Length: 2587
Transcript: NM_001008493
Length: 2587
Transcript: NM_001008493
Intron
Length: 534
Transcript: NM_001008493
Length: 534
Transcript: NM_001008493
Reaction
Expected peak: 196
1.3M
refseq_ENAH.F1
refseq_ENAH.R1
Expected peak: 196
1.3M
refseq_ENAH.F1
refseq_ENAH.R1
Exon
Length: 458
Transcript: NM_018212
Length: 458
Transcript: NM_018212
Exon
Length: 166
Transcript: NM_018212
Length: 166
Transcript: NM_018212
Exon
Length: 178
Transcript: NM_018212
Length: 178
Transcript: NM_018212
Exon
Length: 85
Transcript: NM_018212
Length: 85
Transcript: NM_018212
Exon
Length: 368
Transcript: NM_018212
Length: 368
Transcript: NM_018212
Exon
Length: 111
Transcript: NM_018212
Length: 111
Transcript: NM_018212
Exon
Length: 305
Transcript: NM_018212
Length: 305
Transcript: NM_018212
Exon
Length: 146
Transcript: NM_018212
Length: 146
Transcript: NM_018212
Exon
Length: 58
Transcript: NM_018212
Length: 58
Transcript: NM_018212
Exon
Length: 49
Transcript: NM_018212
Length: 49
Transcript: NM_018212
Exon
Length: 67
Transcript: NM_018212
Length: 67
Transcript: NM_018212
Exon
Length: 79
Transcript: NM_018212
Length: 79
Transcript: NM_018212
Exon
Length: 58
Transcript: NM_018212
Length: 58
Transcript: NM_018212
Exon
Length: 10981
Transcript: NM_018212
Length: 10981
Transcript: NM_018212
Intron
Length: 85271
Transcript: NM_018212
Length: 85271
Transcript: NM_018212
Intron
Length: 12165
Transcript: NM_018212
Length: 12165
Transcript: NM_018212
Intron
Length: 24267
Transcript: NM_018212
Length: 24267
Transcript: NM_018212
Intron
Length: 10988
Transcript: NM_018212
Length: 10988
Transcript: NM_018212
Intron
Length: 1891
Transcript: NM_018212
Length: 1891
Transcript: NM_018212
Intron
Length: 2295
Transcript: NM_018212
Length: 2295
Transcript: NM_018212
Intron
Length: 1579
Transcript: NM_018212
Length: 1579
Transcript: NM_018212
Intron
Length: 156
Transcript: NM_018212
Length: 156
Transcript: NM_018212
Intron
Length: 797
Transcript: NM_018212
Length: 797
Transcript: NM_018212
Intron
Length: 3793
Transcript: NM_018212
Length: 3793
Transcript: NM_018212
Intron
Length: 6880
Transcript: NM_018212
Length: 6880
Transcript: NM_018212
Intron
Length: 2587
Transcript: NM_018212
Length: 2587
Transcript: NM_018212
Intron
Length: 534
Transcript: NM_018212
Length: 534
Transcript: NM_018212
Reaction
Expected peak: 133
115.1M
refseq_ENAH.F1
refseq_ENAH.R1
Expected peak: 133
115.1M
refseq_ENAH.F1
refseq_ENAH.R1
refseq_ENAH.F1
GAGCCTGTAACTTCTAAGGCCTC
GAGCCTGTAACTTCTAAGGCCTC
refseq_ENAH.R1
GCTGTGATAAGGGTGTGGATTT
GCTGTGATAAGGGTGTGGATTT