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Home Supplementary data Tumor microenvironment associated modifications of alternative splicing RefSeq Splicing factors screen LCM Validation sample set, epithelial signature permalink
LCM Validation sample set, epithelial signature ⚙
QPCR Primer Pair List : primer pair list
Gene Forward Reverse
VIEW ACIN1 ACIN1_G_3_f ACIN1_G_2_r
VIEW AFF2 AFF2_G_1_f AFF2_G_r
VIEW AMY1A/AMY2A/AMY2B/RNPC3 RNPC3_G_f RNPC3_G_r
VIEW BCAS2 BCAS2_G_f BCAS2_G_r
VIEW CASC3 CASC3_G_f CASC3_G_r
VIEW CCAR1 CCAR1_G_1_f CCAR1_G_r
VIEW CCDC49/CWC25 CCDC49.G1.F1 CCDC49.G1.R1
VIEW CIR1 CIR_G_1_f CIR_G_r
VIEW CLNS1A CLNS1A_G_1_f CLNS1A_G_r
VIEW CTNNBL1 CTNNBL1_G_f CTNNBL1_G_1_r
VIEW CWC27 SDCCAG10_G_f SDCCAG10_G_1_r
VIEW DDX17 DDX17_G_1_f DDX17_G_r
VIEW DDX39 DDX39_G_1_f DDX39_G_r
VIEW DDX42 DDX42_G_f DDX42_G_1_r
VIEW DGCR14 DGCR14_G_f DGCR14_G_r
VIEW DHX38 DHX38_G_f DHX38_G_r
VIEW EWSR1 EWSR1_G_1_f EWSR1_G_r
VIEW GTF2F1 GTF2F1_G_1_f GTF2F1_G_r
VIEW HNRNPA0 HNRNPA0_G_f HNRNPA0_G_r
VIEW HNRNPA1 HNRNPA1_G_f HNRNPA1_G_r
QPCR Relative Expression Quantification : Summary

Expression Table

ID Name
1 OVC 517 E
2 OVC 552 E
3 OVC 563 E
4 OVC 78 E
5 OVN 308 FTE
6 OVN 334 FTE
7 OVN 458 FTE
8 OVN 483 FTE
Primer Pair S1 S2 S3 S4 S5 S6 S7 S8
A2BP1_G_f A2BP1_G_r 1.000
ACIN1_G_3_f ACIN1_G_2_r 0.632 0.127 0.337 0.018 0.724 0.594 1.667 1.015
AFF2_G_1_f AFF2_G_r 1.521 0.321 0.535 2.437 0.310 1.201 1.489
BCAS2_G_f BCAS2_G_r 4.447 10.257 1.193 0.339 1.661
CASC3_G_f CASC3_G_r 0.727 0.203 0.317 0.307 1.958 0.734
CCAR1_G_1_f CCAR1_G_r 0.597 0.326 0.351 0.089 0.418 0.613 1.912 1.057
CCDC49.G1.F1 CCDC49.G1.R1 0.824 0.316 0.274 0.012 0.378 0.310 1.414 1.898
CIR_G_1_f CIR_G_r 1.564 0.222 0.188 0.170 1.675 1.156
CLNS1A_G_1_f CLNS1A_G_r 1.720 0.389 0.719 0.031 0.603 0.522 1.435 1.440
CROP_G_1_f CROP_G_r 0.507 0.089 0.298 0.590 0.426 1.766 1.218
CTNNBL1_G_f CTNNBL1_G_1_r 0.705 0.361 0.408 1.661 0.357 0.982
DDX17_G_1_f DDX17_G_r 0.358 0.105 0.232 0.107 0.565 0.664 1.383 1.388
DDX39_G_1_f DDX39_G_r 2.127 0.709 1.232 0.444 0.745 0.846 1.012 1.397
DDX42_G_f DDX42_G_1_r 0.999 0.149 0.354 0.007 0.810 0.447 2.010 0.733
DGCR14_G_f DGCR14_G_r 3.426 0.433 0.444 0.770 0.449 1.039 1.741
DHX38_G_f DHX38_G_r 0.596 0.157 0.134 0.017 0.349 2.350 0.948 0.353
EWSR1_G_1_f EWSR1_G_r 0.612 0.103 0.150 0.029 0.881 0.768 1.347 1.003
GTF2F1_G_1_f GTF2F1_G_r 1.078 0.087 0.146 0.178 0.681 0.726 1.326 1.268
HNRNPA0_G_f HNRNPA0_G_r 2.244 0.252 0.334 0.014 0.656 1.596 0.747
HNRNPA1_G_f HNRNPA1_G_r 1.564 0.351 0.311 0.004 0.579 1.305 1.116
QPCR Relative Expression Quantification (grouped) : Summary

Expression Table

ID Name
1 OVC E
2 OVN FT E
Primer Pair S1 p1 q1 S2 p2 q2
A2BP1_G_f A2BP1_G_r 40.141 1.000
ACIN1_G_3_f ACIN1_G_2_r 0.474 1.12e-01 1.000
AFF2_G_1_f AFF2_G_r 1.093 8.67e-01 1.000
BCAS2_G_f BCAS2_G_r 3.701 2.10e-01 1.000
CASC3_G_f CASC3_G_r 0.428 2.57e-01 1.000
CCAR1_G_1_f CCAR1_G_r 0.476 1.26e-01 1.000
CCDC49.G1.F1 CCDC49.G1.R1 0.363 1.14e-01 1.000
CIR_G_1_f CIR_G_r 0.704 6.45e-01 1.000
CLNS1A_G_1_f CLNS1A_G_r 0.674 3.74e-01 1.000
CROP_G_1_f CROP_G_r 0.511 2.03e-01 1.000
CTNNBL1_G_f CTNNBL1_G_1_r 0.506 1.74e-01 1.000
DDX17_G_1_f DDX17_G_r 0.246 9.55e-03 1.000
DDX39_G_1_f DDX39_G_r 2.804 3.13e-01 1.000
DDX42_G_f DDX42_G_1_r 0.505 2.09e-01 1.000
DGCR14_G_f DGCR14_G_r 1.797 3.96e-01 1.000
DHX38_G_f DHX38_G_r 0.293 1.25e-01 1.000
EWSR1_G_1_f EWSR1_G_r 0.573 3.04e-01 1.000
GTF2F1_G_1_f GTF2F1_G_r 0.566 1.95e-01 1.000
HNRNPA0_G_f HNRNPA0_G_r 0.998 9.98e-01 1.000
HNRNPA1_G_f HNRNPA1_G_r 0.811 6.52e-01 1.000
QPCR Reference Gene Page : .

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