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LGFUS Public Data
Identification of alternative splicing markers for breast cancer
2. Breast Validation Screen
Transcript map
: FGFR3
Exon
Length: 159
Transcript: FGFR3.aAug05
Length: 159
Transcript: FGFR3.aAug05
Exon
Length: 211
Transcript: FGFR3.aAug05
Length: 211
Transcript: FGFR3.aAug05
Exon
Length: 270
Transcript: FGFR3.aAug05
Length: 270
Transcript: FGFR3.aAug05
Exon
Length: 66
Transcript: FGFR3.aAug05
Length: 66
Transcript: FGFR3.aAug05
Exon
Length: 170
Transcript: FGFR3.aAug05
Length: 170
Transcript: FGFR3.aAug05
Exon
Length: 124
Transcript: FGFR3.aAug05
Length: 124
Transcript: FGFR3.aAug05
Exon
Length: 191
Transcript: FGFR3.aAug05
Length: 191
Transcript: FGFR3.aAug05
Exon
Length: 145
Transcript: FGFR3.aAug05
Length: 145
Transcript: FGFR3.aAug05
Exon
Length: 191
Transcript: FGFR3.aAug05
Length: 191
Transcript: FGFR3.aAug05
Exon
Length: 149
Transcript: FGFR3.aAug05
Length: 149
Transcript: FGFR3.aAug05
Exon
Length: 122
Transcript: FGFR3.aAug05
Length: 122
Transcript: FGFR3.aAug05
Exon
Length: 111
Transcript: FGFR3.aAug05
Length: 111
Transcript: FGFR3.aAug05
Exon
Length: 191
Transcript: FGFR3.aAug05
Length: 191
Transcript: FGFR3.aAug05
Exon
Length: 123
Transcript: FGFR3.aAug05
Length: 123
Transcript: FGFR3.aAug05
Exon
Length: 138
Transcript: FGFR3.aAug05
Length: 138
Transcript: FGFR3.aAug05
Exon
Length: 106
Transcript: FGFR3.aAug05
Length: 106
Transcript: FGFR3.aAug05
Exon
Length: 1756
Transcript: FGFR3.aAug05
Length: 1756
Transcript: FGFR3.aAug05
Intron
Length: 367
Transcript: FGFR3.aAug05
Length: 367
Transcript: FGFR3.aAug05
Intron
Length: 5210
Transcript: FGFR3.aAug05
Length: 5210
Transcript: FGFR3.aAug05
Intron
Length: 223
Transcript: FGFR3.aAug05
Length: 223
Transcript: FGFR3.aAug05
Intron
Length: 1554
Transcript: FGFR3.aAug05
Length: 1554
Transcript: FGFR3.aAug05
Intron
Length: 83
Transcript: FGFR3.aAug05
Length: 83
Transcript: FGFR3.aAug05
Intron
Length: 91
Transcript: FGFR3.aAug05
Length: 91
Transcript: FGFR3.aAug05
Intron
Length: 1666
Transcript: FGFR3.aAug05
Length: 1666
Transcript: FGFR3.aAug05
Intron
Length: 493
Transcript: FGFR3.aAug05
Length: 493
Transcript: FGFR3.aAug05
Intron
Length: 300
Transcript: FGFR3.aAug05
Length: 300
Transcript: FGFR3.aAug05
Intron
Length: 385
Transcript: FGFR3.aAug05
Length: 385
Transcript: FGFR3.aAug05
Intron
Length: 82
Transcript: FGFR3.aAug05
Length: 82
Transcript: FGFR3.aAug05
Intron
Length: 80
Transcript: FGFR3.aAug05
Length: 80
Transcript: FGFR3.aAug05
Intron
Length: 110
Transcript: FGFR3.aAug05
Length: 110
Transcript: FGFR3.aAug05
Intron
Length: 372
Transcript: FGFR3.aAug05
Length: 372
Transcript: FGFR3.aAug05
Intron
Length: 145
Transcript: FGFR3.aAug05
Length: 145
Transcript: FGFR3.aAug05
Intron
Length: 181
Transcript: FGFR3.aAug05
Length: 181
Transcript: FGFR3.aAug05
Reaction
Expected peak: 499
Associated peak: 535,536,537,538,539,540,541,542,543,544,545,546,547,549,550
Repeated 51 time
Molarity: 5.65M
Forward: FGFR3.F3
Reverse: FGFR3.R3
Expected peak: 499
Associated peak: 535,536,537,538,539,540,541,542,543,544,545,546,547,549,550
Repeated 51 time
Molarity: 5.65M
Forward: FGFR3.F3
Reverse: FGFR3.R3
Exon
Length: 148
Transcript: FGFR3.bAug05
Length: 148
Transcript: FGFR3.bAug05
Exon
Length: 270
Transcript: FGFR3.bAug05
Length: 270
Transcript: FGFR3.bAug05
Exon
Length: 66
Transcript: FGFR3.bAug05
Length: 66
Transcript: FGFR3.bAug05
Exon
Length: 170
Transcript: FGFR3.bAug05
Length: 170
Transcript: FGFR3.bAug05
Exon
Length: 124
Transcript: FGFR3.bAug05
Length: 124
Transcript: FGFR3.bAug05
Exon
Length: 191
Transcript: FGFR3.bAug05
Length: 191
Transcript: FGFR3.bAug05
Exon
Length: 145
Transcript: FGFR3.bAug05
Length: 145
Transcript: FGFR3.bAug05
Exon
Length: 191
Transcript: FGFR3.bAug05
Length: 191
Transcript: FGFR3.bAug05
Exon
Length: 146
Transcript: FGFR3.bAug05
Length: 146
Transcript: FGFR3.bAug05
Exon
Length: 122
Transcript: FGFR3.bAug05
Length: 122
Transcript: FGFR3.bAug05
Exon
Length: 111
Transcript: FGFR3.bAug05
Length: 111
Transcript: FGFR3.bAug05
Exon
Length: 191
Transcript: FGFR3.bAug05
Length: 191
Transcript: FGFR3.bAug05
Exon
Length: 123
Transcript: FGFR3.bAug05
Length: 123
Transcript: FGFR3.bAug05
Exon
Length: 71
Transcript: FGFR3.bAug05
Length: 71
Transcript: FGFR3.bAug05
Exon
Length: 138
Transcript: FGFR3.bAug05
Length: 138
Transcript: FGFR3.bAug05
Exon
Length: 106
Transcript: FGFR3.bAug05
Length: 106
Transcript: FGFR3.bAug05
Exon
Length: 1756
Transcript: FGFR3.bAug05
Length: 1756
Transcript: FGFR3.bAug05
Intron
Length: 5210
Transcript: FGFR3.bAug05
Length: 5210
Transcript: FGFR3.bAug05
Intron
Length: 223
Transcript: FGFR3.bAug05
Length: 223
Transcript: FGFR3.bAug05
Intron
Length: 1554
Transcript: FGFR3.bAug05
Length: 1554
Transcript: FGFR3.bAug05
Intron
Length: 83
Transcript: FGFR3.bAug05
Length: 83
Transcript: FGFR3.bAug05
Intron
Length: 91
Transcript: FGFR3.bAug05
Length: 91
Transcript: FGFR3.bAug05
Intron
Length: 1666
Transcript: FGFR3.bAug05
Length: 1666
Transcript: FGFR3.bAug05
Intron
Length: 493
Transcript: FGFR3.bAug05
Length: 493
Transcript: FGFR3.bAug05
Intron
Length: 303
Transcript: FGFR3.bAug05
Length: 303
Transcript: FGFR3.bAug05
Intron
Length: 385
Transcript: FGFR3.bAug05
Length: 385
Transcript: FGFR3.bAug05
Intron
Length: 82
Transcript: FGFR3.bAug05
Length: 82
Transcript: FGFR3.bAug05
Intron
Length: 80
Transcript: FGFR3.bAug05
Length: 80
Transcript: FGFR3.bAug05
Intron
Length: 110
Transcript: FGFR3.bAug05
Length: 110
Transcript: FGFR3.bAug05
Intron
Length: 83
Transcript: FGFR3.bAug05
Length: 83
Transcript: FGFR3.bAug05
Intron
Length: 218
Transcript: FGFR3.bAug05
Length: 218
Transcript: FGFR3.bAug05
Intron
Length: 145
Transcript: FGFR3.bAug05
Length: 145
Transcript: FGFR3.bAug05
Intron
Length: 181
Transcript: FGFR3.bAug05
Length: 181
Transcript: FGFR3.bAug05
Reaction
Expected peak: 496
Associated peak: 535,536,537,538,539,540,541,542,543,544,545,546,547
Repeated 51 time
Molarity: 4.68M
Forward: FGFR3.F3
Reverse: FGFR3.R3
Expected peak: 496
Associated peak: 535,536,537,538,539,540,541,542,543,544,545,546,547
Repeated 51 time
Molarity: 4.68M
Forward: FGFR3.F3
Reverse: FGFR3.R3
Exon
Length: 148
Transcript: FGFR3.cAug05
Length: 148
Transcript: FGFR3.cAug05
Exon
Length: 270
Transcript: FGFR3.cAug05
Length: 270
Transcript: FGFR3.cAug05
Exon
Length: 66
Transcript: FGFR3.cAug05
Length: 66
Transcript: FGFR3.cAug05
Exon
Length: 170
Transcript: FGFR3.cAug05
Length: 170
Transcript: FGFR3.cAug05
Exon
Length: 124
Transcript: FGFR3.cAug05
Length: 124
Transcript: FGFR3.cAug05
Exon
Length: 191
Transcript: FGFR3.cAug05
Length: 191
Transcript: FGFR3.cAug05
Exon
Length: 146
Transcript: FGFR3.cAug05
Length: 146
Transcript: FGFR3.cAug05
Exon
Length: 122
Transcript: FGFR3.cAug05
Length: 122
Transcript: FGFR3.cAug05
Exon
Length: 111
Transcript: FGFR3.cAug05
Length: 111
Transcript: FGFR3.cAug05
Exon
Length: 191
Transcript: FGFR3.cAug05
Length: 191
Transcript: FGFR3.cAug05
Exon
Length: 123
Transcript: FGFR3.cAug05
Length: 123
Transcript: FGFR3.cAug05
Exon
Length: 71
Transcript: FGFR3.cAug05
Length: 71
Transcript: FGFR3.cAug05
Exon
Length: 138
Transcript: FGFR3.cAug05
Length: 138
Transcript: FGFR3.cAug05
Exon
Length: 106
Transcript: FGFR3.cAug05
Length: 106
Transcript: FGFR3.cAug05
Exon
Length: 1757
Transcript: FGFR3.cAug05
Length: 1757
Transcript: FGFR3.cAug05
Intron
Length: 5210
Transcript: FGFR3.cAug05
Length: 5210
Transcript: FGFR3.cAug05
Intron
Length: 223
Transcript: FGFR3.cAug05
Length: 223
Transcript: FGFR3.cAug05
Intron
Length: 1554
Transcript: FGFR3.cAug05
Length: 1554
Transcript: FGFR3.cAug05
Intron
Length: 83
Transcript: FGFR3.cAug05
Length: 83
Transcript: FGFR3.cAug05
Intron
Length: 91
Transcript: FGFR3.cAug05
Length: 91
Transcript: FGFR3.cAug05
Intron
Length: 2798
Transcript: FGFR3.cAug05
Length: 2798
Transcript: FGFR3.cAug05
Intron
Length: 385
Transcript: FGFR3.cAug05
Length: 385
Transcript: FGFR3.cAug05
Intron
Length: 82
Transcript: FGFR3.cAug05
Length: 82
Transcript: FGFR3.cAug05
Intron
Length: 80
Transcript: FGFR3.cAug05
Length: 80
Transcript: FGFR3.cAug05
Intron
Length: 110
Transcript: FGFR3.cAug05
Length: 110
Transcript: FGFR3.cAug05
Intron
Length: 83
Transcript: FGFR3.cAug05
Length: 83
Transcript: FGFR3.cAug05
Intron
Length: 218
Transcript: FGFR3.cAug05
Length: 218
Transcript: FGFR3.cAug05
Intron
Length: 145
Transcript: FGFR3.cAug05
Length: 145
Transcript: FGFR3.cAug05
Intron
Length: 181
Transcript: FGFR3.cAug05
Length: 181
Transcript: FGFR3.cAug05
Reaction
Expected peak: 160
Associated peak: 177,178,179,180,181,184
Repeated 51 time
Molarity: 6.15M
Forward: FGFR3.F3
Reverse: FGFR3.R3
Expected peak: 160
Associated peak: 177,178,179,180,181,184
Repeated 51 time
Molarity: 6.15M
Forward: FGFR3.F3
Reverse: FGFR3.R3
Exon
Length: 115
Transcript: FGFR3.dAug05
Length: 115
Transcript: FGFR3.dAug05
Exon
Length: 191
Transcript: FGFR3.dAug05
Length: 191
Transcript: FGFR3.dAug05
Exon
Length: 239
Transcript: FGFR3.dAug05
Length: 239
Transcript: FGFR3.dAug05
Intron
Length: 91
Transcript: FGFR3.dAug05
Length: 91
Transcript: FGFR3.dAug05
Intron
Length: 888
Transcript: FGFR3.dAug05
Length: 888
Transcript: FGFR3.dAug05
Exon
Length: 75
Transcript: FGFR3.eAug05
Length: 75
Transcript: FGFR3.eAug05
Exon
Length: 124
Transcript: FGFR3.eAug05
Length: 124
Transcript: FGFR3.eAug05
Exon
Length: 152
Transcript: FGFR3.eAug05
Length: 152
Transcript: FGFR3.eAug05
Exon
Length: 48
Transcript: FGFR3.eAug05
Length: 48
Transcript: FGFR3.eAug05
Intron
Length: 83
Transcript: FGFR3.eAug05
Length: 83
Transcript: FGFR3.eAug05
Intron
Length: 91
Transcript: FGFR3.eAug05
Length: 91
Transcript: FGFR3.eAug05
Intron
Length: 1705
Transcript: FGFR3.eAug05
Length: 1705
Transcript: FGFR3.eAug05
Exon
Length: 75
Transcript: FGFR3.gAug05
Length: 75
Transcript: FGFR3.gAug05
Exon
Length: 124
Transcript: FGFR3.gAug05
Length: 124
Transcript: FGFR3.gAug05
Exon
Length: 89
Transcript: FGFR3.gAug05
Length: 89
Transcript: FGFR3.gAug05
Exon
Length: 48
Transcript: FGFR3.gAug05
Length: 48
Transcript: FGFR3.gAug05
Intron
Length: 83
Transcript: FGFR3.gAug05
Length: 83
Transcript: FGFR3.gAug05
Intron
Length: 91
Transcript: FGFR3.gAug05
Length: 91
Transcript: FGFR3.gAug05
Intron
Length: 1768
Transcript: FGFR3.gAug05
Length: 1768
Transcript: FGFR3.gAug05
Exon
Length: 582
Transcript: FGFR3.shed1.aAug05
Length: 582
Transcript: FGFR3.shed1.aAug05
FGFR3.F3
GAGTTCCACTGCAAGGTGTACA
GAGTTCCACTGCAAGGTGTACA
FGFR3.R3
GTGGTGTGTTGGAGCTCATG
GTGGTGTGTTGGAGCTCATG