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Identification of alternative splicing markers for breast cancer
2. Breast Validation Screen
Transcript map
: PSAP
Exon
Length: 188
Transcript: PSAP.aAug05
Length: 188
Transcript: PSAP.aAug05
Exon
Length: 134
Transcript: PSAP.aAug05
Length: 134
Transcript: PSAP.aAug05
Exon
Length: 75
Transcript: PSAP.aAug05
Length: 75
Transcript: PSAP.aAug05
Exon
Length: 126
Transcript: PSAP.aAug05
Length: 126
Transcript: PSAP.aAug05
Exon
Length: 201
Transcript: PSAP.aAug05
Length: 201
Transcript: PSAP.aAug05
Exon
Length: 144
Transcript: PSAP.aAug05
Length: 144
Transcript: PSAP.aAug05
Exon
Length: 57
Transcript: PSAP.aAug05
Length: 57
Transcript: PSAP.aAug05
Exon
Length: 132
Transcript: PSAP.aAug05
Length: 132
Transcript: PSAP.aAug05
Exon
Length: 96
Transcript: PSAP.aAug05
Length: 96
Transcript: PSAP.aAug05
Exon
Length: 187
Transcript: PSAP.aAug05
Length: 187
Transcript: PSAP.aAug05
Exon
Length: 158
Transcript: PSAP.aAug05
Length: 158
Transcript: PSAP.aAug05
Exon
Length: 81
Transcript: PSAP.aAug05
Length: 81
Transcript: PSAP.aAug05
Exon
Length: 108
Transcript: PSAP.aAug05
Length: 108
Transcript: PSAP.aAug05
Exon
Length: 1188
Transcript: PSAP.aAug05
Length: 1188
Transcript: PSAP.aAug05
Intron
Length: 16676
Transcript: PSAP.aAug05
Length: 16676
Transcript: PSAP.aAug05
Intron
Length: 2451
Transcript: PSAP.aAug05
Length: 2451
Transcript: PSAP.aAug05
Intron
Length: 594
Transcript: PSAP.aAug05
Length: 594
Transcript: PSAP.aAug05
Intron
Length: 2048
Transcript: PSAP.aAug05
Length: 2048
Transcript: PSAP.aAug05
Intron
Length: 719
Transcript: PSAP.aAug05
Length: 719
Transcript: PSAP.aAug05
Intron
Length: 2120
Transcript: PSAP.aAug05
Length: 2120
Transcript: PSAP.aAug05
Intron
Length: 3829
Transcript: PSAP.aAug05
Length: 3829
Transcript: PSAP.aAug05
Intron
Length: 1540
Transcript: PSAP.aAug05
Length: 1540
Transcript: PSAP.aAug05
Intron
Length: 339
Transcript: PSAP.aAug05
Length: 339
Transcript: PSAP.aAug05
Intron
Length: 91
Transcript: PSAP.aAug05
Length: 91
Transcript: PSAP.aAug05
Intron
Length: 353
Transcript: PSAP.aAug05
Length: 353
Transcript: PSAP.aAug05
Intron
Length: 306
Transcript: PSAP.aAug05
Length: 306
Transcript: PSAP.aAug05
Intron
Length: 1140
Transcript: PSAP.aAug05
Length: 1140
Transcript: PSAP.aAug05
Reaction
Expected peak: 188
Associated peak: 201,202,203,204,205,211,212,213,214
Repeated 51 time
Molarity: 52.27M
Forward: PSAP.F24
Reverse: PSAP.R24
Expected peak: 188
Associated peak: 201,202,203,204,205,211,212,213,214
Repeated 51 time
Molarity: 52.27M
Forward: PSAP.F24
Reverse: PSAP.R24
Exon
Length: 57
Transcript: PSAP.bAug05
Length: 57
Transcript: PSAP.bAug05
Exon
Length: 128
Transcript: PSAP.bAug05
Length: 128
Transcript: PSAP.bAug05
Exon
Length: 75
Transcript: PSAP.bAug05
Length: 75
Transcript: PSAP.bAug05
Exon
Length: 126
Transcript: PSAP.bAug05
Length: 126
Transcript: PSAP.bAug05
Exon
Length: 201
Transcript: PSAP.bAug05
Length: 201
Transcript: PSAP.bAug05
Exon
Length: 144
Transcript: PSAP.bAug05
Length: 144
Transcript: PSAP.bAug05
Exon
Length: 57
Transcript: PSAP.bAug05
Length: 57
Transcript: PSAP.bAug05
Exon
Length: 132
Transcript: PSAP.bAug05
Length: 132
Transcript: PSAP.bAug05
Exon
Length: 96
Transcript: PSAP.bAug05
Length: 96
Transcript: PSAP.bAug05
Exon
Length: 187
Transcript: PSAP.bAug05
Length: 187
Transcript: PSAP.bAug05
Exon
Length: 158
Transcript: PSAP.bAug05
Length: 158
Transcript: PSAP.bAug05
Exon
Length: 81
Transcript: PSAP.bAug05
Length: 81
Transcript: PSAP.bAug05
Exon
Length: 54
Transcript: PSAP.bAug05
Length: 54
Transcript: PSAP.bAug05
Exon
Length: 46
Transcript: PSAP.bAug05
Length: 46
Transcript: PSAP.bAug05
Intron
Length: 16682
Transcript: PSAP.bAug05
Length: 16682
Transcript: PSAP.bAug05
Intron
Length: 2451
Transcript: PSAP.bAug05
Length: 2451
Transcript: PSAP.bAug05
Intron
Length: 594
Transcript: PSAP.bAug05
Length: 594
Transcript: PSAP.bAug05
Intron
Length: 2048
Transcript: PSAP.bAug05
Length: 2048
Transcript: PSAP.bAug05
Intron
Length: 719
Transcript: PSAP.bAug05
Length: 719
Transcript: PSAP.bAug05
Intron
Length: 2120
Transcript: PSAP.bAug05
Length: 2120
Transcript: PSAP.bAug05
Intron
Length: 3829
Transcript: PSAP.bAug05
Length: 3829
Transcript: PSAP.bAug05
Intron
Length: 1540
Transcript: PSAP.bAug05
Length: 1540
Transcript: PSAP.bAug05
Intron
Length: 339
Transcript: PSAP.bAug05
Length: 339
Transcript: PSAP.bAug05
Intron
Length: 91
Transcript: PSAP.bAug05
Length: 91
Transcript: PSAP.bAug05
Intron
Length: 353
Transcript: PSAP.bAug05
Length: 353
Transcript: PSAP.bAug05
Intron
Length: 360
Transcript: PSAP.bAug05
Length: 360
Transcript: PSAP.bAug05
Intron
Length: 1140
Transcript: PSAP.bAug05
Length: 1140
Transcript: PSAP.bAug05
Reaction
Expected peak: 188
Associated peak: 201,202,203,204,205,211,212,213,214
Repeated 51 time
Molarity: 52.27M
Forward: PSAP.F24
Reverse: PSAP.R24
Expected peak: 188
Associated peak: 201,202,203,204,205,211,212,213,214
Repeated 51 time
Molarity: 52.27M
Forward: PSAP.F24
Reverse: PSAP.R24
Exon
Length: 58
Transcript: PSAP.cAug05
Length: 58
Transcript: PSAP.cAug05
Exon
Length: 75
Transcript: PSAP.cAug05
Length: 75
Transcript: PSAP.cAug05
Exon
Length: 126
Transcript: PSAP.cAug05
Length: 126
Transcript: PSAP.cAug05
Exon
Length: 201
Transcript: PSAP.cAug05
Length: 201
Transcript: PSAP.cAug05
Exon
Length: 144
Transcript: PSAP.cAug05
Length: 144
Transcript: PSAP.cAug05
Exon
Length: 57
Transcript: PSAP.cAug05
Length: 57
Transcript: PSAP.cAug05
Exon
Length: 132
Transcript: PSAP.cAug05
Length: 132
Transcript: PSAP.cAug05
Exon
Length: 39
Transcript: PSAP.cAug05
Length: 39
Transcript: PSAP.cAug05
Exon
Length: 110
Transcript: PSAP.cAug05
Length: 110
Transcript: PSAP.cAug05
Intron
Length: 19261
Transcript: PSAP.cAug05
Length: 19261
Transcript: PSAP.cAug05
Intron
Length: 594
Transcript: PSAP.cAug05
Length: 594
Transcript: PSAP.cAug05
Intron
Length: 2048
Transcript: PSAP.cAug05
Length: 2048
Transcript: PSAP.cAug05
Intron
Length: 719
Transcript: PSAP.cAug05
Length: 719
Transcript: PSAP.cAug05
Intron
Length: 2120
Transcript: PSAP.cAug05
Length: 2120
Transcript: PSAP.cAug05
Intron
Length: 3829
Transcript: PSAP.cAug05
Length: 3829
Transcript: PSAP.cAug05
Intron
Length: 1540
Transcript: PSAP.cAug05
Length: 1540
Transcript: PSAP.cAug05
Intron
Length: 3889
Transcript: PSAP.cAug05
Length: 3889
Transcript: PSAP.cAug05
Reaction
Expected peak: 188
Associated peak: 201,202,203,204,205,211,212,213,214
Repeated 51 time
Molarity: 52.27M
Forward: PSAP.F24
Reverse: PSAP.R24
Expected peak: 188
Associated peak: 201,202,203,204,205,211,212,213,214
Repeated 51 time
Molarity: 52.27M
Forward: PSAP.F24
Reverse: PSAP.R24
Exon
Length: 1542
Transcript: PSAP.dAug05
Length: 1542
Transcript: PSAP.dAug05
Exon
Length: 96
Transcript: PSAP.dAug05
Length: 96
Transcript: PSAP.dAug05
Exon
Length: 187
Transcript: PSAP.dAug05
Length: 187
Transcript: PSAP.dAug05
Exon
Length: 158
Transcript: PSAP.dAug05
Length: 158
Transcript: PSAP.dAug05
Exon
Length: 81
Transcript: PSAP.dAug05
Length: 81
Transcript: PSAP.dAug05
Exon
Length: 108
Transcript: PSAP.dAug05
Length: 108
Transcript: PSAP.dAug05
Exon
Length: 1179
Transcript: PSAP.dAug05
Length: 1179
Transcript: PSAP.dAug05
Intron
Length: 1540
Transcript: PSAP.dAug05
Length: 1540
Transcript: PSAP.dAug05
Intron
Length: 339
Transcript: PSAP.dAug05
Length: 339
Transcript: PSAP.dAug05
Intron
Length: 91
Transcript: PSAP.dAug05
Length: 91
Transcript: PSAP.dAug05
Intron
Length: 353
Transcript: PSAP.dAug05
Length: 353
Transcript: PSAP.dAug05
Intron
Length: 306
Transcript: PSAP.dAug05
Length: 306
Transcript: PSAP.dAug05
Intron
Length: 1140
Transcript: PSAP.dAug05
Length: 1140
Transcript: PSAP.dAug05
Exon
Length: 64
Transcript: PSAP.eAug05
Length: 64
Transcript: PSAP.eAug05
Exon
Length: 134
Transcript: PSAP.eAug05
Length: 134
Transcript: PSAP.eAug05
Exon
Length: 75
Transcript: PSAP.eAug05
Length: 75
Transcript: PSAP.eAug05
Exon
Length: 126
Transcript: PSAP.eAug05
Length: 126
Transcript: PSAP.eAug05
Exon
Length: 199
Transcript: PSAP.eAug05
Length: 199
Transcript: PSAP.eAug05
Intron
Length: 15909
Transcript: PSAP.eAug05
Length: 15909
Transcript: PSAP.eAug05
Intron
Length: 2451
Transcript: PSAP.eAug05
Length: 2451
Transcript: PSAP.eAug05
Intron
Length: 594
Transcript: PSAP.eAug05
Length: 594
Transcript: PSAP.eAug05
Intron
Length: 2048
Transcript: PSAP.eAug05
Length: 2048
Transcript: PSAP.eAug05
Exon
Length: 74
Transcript: PSAP.fAug05
Length: 74
Transcript: PSAP.fAug05
Exon
Length: 187
Transcript: PSAP.fAug05
Length: 187
Transcript: PSAP.fAug05
Exon
Length: 158
Transcript: PSAP.fAug05
Length: 158
Transcript: PSAP.fAug05
Exon
Length: 81
Transcript: PSAP.fAug05
Length: 81
Transcript: PSAP.fAug05
Exon
Length: 61
Transcript: PSAP.fAug05
Length: 61
Transcript: PSAP.fAug05
Exon
Length: 446
Transcript: PSAP.fAug05
Length: 446
Transcript: PSAP.fAug05
Intron
Length: 339
Transcript: PSAP.fAug05
Length: 339
Transcript: PSAP.fAug05
Intron
Length: 91
Transcript: PSAP.fAug05
Length: 91
Transcript: PSAP.fAug05
Intron
Length: 353
Transcript: PSAP.fAug05
Length: 353
Transcript: PSAP.fAug05
Intron
Length: 306
Transcript: PSAP.fAug05
Length: 306
Transcript: PSAP.fAug05
Intron
Length: 1544
Transcript: PSAP.fAug05
Length: 1544
Transcript: PSAP.fAug05
Exon
Length: 69
Transcript: PSAP.gAug05
Length: 69
Transcript: PSAP.gAug05
Exon
Length: 67
Transcript: PSAP.gAug05
Length: 67
Transcript: PSAP.gAug05
Exon
Length: 158
Transcript: PSAP.gAug05
Length: 158
Transcript: PSAP.gAug05
Exon
Length: 81
Transcript: PSAP.gAug05
Length: 81
Transcript: PSAP.gAug05
Exon
Length: 108
Transcript: PSAP.gAug05
Length: 108
Transcript: PSAP.gAug05
Exon
Length: 303
Transcript: PSAP.gAug05
Length: 303
Transcript: PSAP.gAug05
Exon
Length: 125
Transcript: PSAP.gAug05
Length: 125
Transcript: PSAP.gAug05
Intron
Length: 48
Transcript: PSAP.gAug05
Length: 48
Transcript: PSAP.gAug05
Intron
Length: 91
Transcript: PSAP.gAug05
Length: 91
Transcript: PSAP.gAug05
Intron
Length: 353
Transcript: PSAP.gAug05
Length: 353
Transcript: PSAP.gAug05
Intron
Length: 306
Transcript: PSAP.gAug05
Length: 306
Transcript: PSAP.gAug05
Intron
Length: 1140
Transcript: PSAP.gAug05
Length: 1140
Transcript: PSAP.gAug05
Intron
Length: 444
Transcript: PSAP.gAug05
Length: 444
Transcript: PSAP.gAug05
Exon
Length: 56
Transcript: PSAP.hAug05
Length: 56
Transcript: PSAP.hAug05
Exon
Length: 132
Transcript: PSAP.hAug05
Length: 132
Transcript: PSAP.hAug05
Exon
Length: 96
Transcript: PSAP.hAug05
Length: 96
Transcript: PSAP.hAug05
Exon
Length: 24
Transcript: PSAP.hAug05
Length: 24
Transcript: PSAP.hAug05
Exon
Length: 109
Transcript: PSAP.hAug05
Length: 109
Transcript: PSAP.hAug05
Exon
Length: 21
Transcript: PSAP.hAug05
Length: 21
Transcript: PSAP.hAug05
Intron
Length: 3829
Transcript: PSAP.hAug05
Length: 3829
Transcript: PSAP.hAug05
Intron
Length: 1540
Transcript: PSAP.hAug05
Length: 1540
Transcript: PSAP.hAug05
Intron
Length: 339
Transcript: PSAP.hAug05
Length: 339
Transcript: PSAP.hAug05
Intron
Length: 54
Transcript: PSAP.hAug05
Length: 54
Transcript: PSAP.hAug05
Intron
Length: 91
Transcript: PSAP.hAug05
Length: 91
Transcript: PSAP.hAug05
Reaction
Expected peak: 188
Associated peak: 201,202,203,204,205,211,212,213,214
Repeated 51 time
Molarity: 52.27M
Forward: PSAP.F24
Reverse: PSAP.R24
Expected peak: 188
Associated peak: 201,202,203,204,205,211,212,213,214
Repeated 51 time
Molarity: 52.27M
Forward: PSAP.F24
Reverse: PSAP.R24
Exon
Length: 57
Transcript: PSAP.iAug05
Length: 57
Transcript: PSAP.iAug05
Exon
Length: 134
Transcript: PSAP.iAug05
Length: 134
Transcript: PSAP.iAug05
Exon
Length: 782
Transcript: PSAP.iAug05
Length: 782
Transcript: PSAP.iAug05
Intron
Length: 16676
Transcript: PSAP.iAug05
Length: 16676
Transcript: PSAP.iAug05
Intron
Length: 2451
Transcript: PSAP.iAug05
Length: 2451
Transcript: PSAP.iAug05
Exon
Length: 16
Transcript: PSAP.jAug05
Length: 16
Transcript: PSAP.jAug05
Exon
Length: 81
Transcript: PSAP.jAug05
Length: 81
Transcript: PSAP.jAug05
Exon
Length: 108
Transcript: PSAP.jAug05
Length: 108
Transcript: PSAP.jAug05
Exon
Length: 253
Transcript: PSAP.jAug05
Length: 253
Transcript: PSAP.jAug05
Intron
Length: 353
Transcript: PSAP.jAug05
Length: 353
Transcript: PSAP.jAug05
Intron
Length: 306
Transcript: PSAP.jAug05
Length: 306
Transcript: PSAP.jAug05
Intron
Length: 986
Transcript: PSAP.jAug05
Length: 986
Transcript: PSAP.jAug05
Exon
Length: 241
Transcript: PSAP.kAug05
Length: 241
Transcript: PSAP.kAug05
Exon
Length: 103
Transcript: PSAP.kAug05
Length: 103
Transcript: PSAP.kAug05
Intron
Length: 306
Transcript: PSAP.kAug05
Length: 306
Transcript: PSAP.kAug05
Exon
Length: 781
Transcript: PSAP.shed1.aAug05
Length: 781
Transcript: PSAP.shed1.aAug05
Exon
Length: 521
Transcript: PSAP.shed2.aAug05
Length: 521
Transcript: PSAP.shed2.aAug05
PSAP.R24
AAACATCAGACTTTGCTGGGAC
AAACATCAGACTTTGCTGGGAC
PSAP.F24
TGCTATCCAGATGATGATGCAC
TGCTATCCAGATGATGATGCAC