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Identification of alternative splicing markers for breast cancer
2. Breast Validation Screen
Transcript map
: MDK
Exon
Length: 428
Transcript: MDK.aAug05
Length: 428
Transcript: MDK.aAug05
Exon
Length: 77
Transcript: MDK.aAug05
Length: 77
Transcript: MDK.aAug05
Exon
Length: 168
Transcript: MDK.aAug05
Length: 168
Transcript: MDK.aAug05
Exon
Length: 162
Transcript: MDK.aAug05
Length: 162
Transcript: MDK.aAug05
Exon
Length: 717
Transcript: MDK.aAug05
Length: 717
Transcript: MDK.aAug05
Intron
Length: 873
Transcript: MDK.aAug05
Length: 873
Transcript: MDK.aAug05
Intron
Length: 160
Transcript: MDK.aAug05
Length: 160
Transcript: MDK.aAug05
Intron
Length: 125
Transcript: MDK.aAug05
Length: 125
Transcript: MDK.aAug05
Intron
Length: 720
Transcript: MDK.aAug05
Length: 720
Transcript: MDK.aAug05
Exon
Length: 123
Transcript: MDK.bAug05
Length: 123
Transcript: MDK.bAug05
Exon
Length: 77
Transcript: MDK.bAug05
Length: 77
Transcript: MDK.bAug05
Exon
Length: 168
Transcript: MDK.bAug05
Length: 168
Transcript: MDK.bAug05
Exon
Length: 1220
Transcript: MDK.bAug05
Length: 1220
Transcript: MDK.bAug05
Intron
Length: 873
Transcript: MDK.bAug05
Length: 873
Transcript: MDK.bAug05
Intron
Length: 160
Transcript: MDK.bAug05
Length: 160
Transcript: MDK.bAug05
Intron
Length: 125
Transcript: MDK.bAug05
Length: 125
Transcript: MDK.bAug05
Exon
Length: 423
Transcript: MDK.cAug05
Length: 423
Transcript: MDK.cAug05
Exon
Length: 168
Transcript: MDK.cAug05
Length: 168
Transcript: MDK.cAug05
Exon
Length: 945
Transcript: MDK.cAug05
Length: 945
Transcript: MDK.cAug05
Intron
Length: 160
Transcript: MDK.cAug05
Length: 160
Transcript: MDK.cAug05
Intron
Length: 125
Transcript: MDK.cAug05
Length: 125
Transcript: MDK.cAug05
Reaction
Expected peak: 463
Associated peak: 474,476,477,478,480,481,482,484,486
Repeated 51 time
Molarity: 3.73M
Forward: MDK.F16
Reverse: MDK.R10
Expected peak: 463
Associated peak: 474,476,477,478,480,481,482,484,486
Repeated 51 time
Molarity: 3.73M
Forward: MDK.F16
Reverse: MDK.R10
Exon
Length: 93
Transcript: MDK.dAug05
Length: 93
Transcript: MDK.dAug05
Exon
Length: 77
Transcript: MDK.dAug05
Length: 77
Transcript: MDK.dAug05
Exon
Length: 168
Transcript: MDK.dAug05
Length: 168
Transcript: MDK.dAug05
Exon
Length: 554
Transcript: MDK.dAug05
Length: 554
Transcript: MDK.dAug05
Intron
Length: 298
Transcript: MDK.dAug05
Length: 298
Transcript: MDK.dAug05
Intron
Length: 160
Transcript: MDK.dAug05
Length: 160
Transcript: MDK.dAug05
Intron
Length: 125
Transcript: MDK.dAug05
Length: 125
Transcript: MDK.dAug05
Exon
Length: 381
Transcript: MDK.eAug05
Length: 381
Transcript: MDK.eAug05
Exon
Length: 168
Transcript: MDK.eAug05
Length: 168
Transcript: MDK.eAug05
Exon
Length: 162
Transcript: MDK.eAug05
Length: 162
Transcript: MDK.eAug05
Exon
Length: 331
Transcript: MDK.eAug05
Length: 331
Transcript: MDK.eAug05
Intron
Length: 160
Transcript: MDK.eAug05
Length: 160
Transcript: MDK.eAug05
Intron
Length: 125
Transcript: MDK.eAug05
Length: 125
Transcript: MDK.eAug05
Intron
Length: 720
Transcript: MDK.eAug05
Length: 720
Transcript: MDK.eAug05
Reaction
Expected peak: 463
Associated peak: 474,476,477,478,480,481,482,484,486
Repeated 51 time
Molarity: 3.73M
Forward: MDK.F16
Reverse: MDK.R10
Expected peak: 463
Associated peak: 474,476,477,478,480,481,482,484,486
Repeated 51 time
Molarity: 3.73M
Forward: MDK.F16
Reverse: MDK.R10
Exon
Length: 104
Transcript: MDK.fAug05
Length: 104
Transcript: MDK.fAug05
Exon
Length: 77
Transcript: MDK.fAug05
Length: 77
Transcript: MDK.fAug05
Exon
Length: 168
Transcript: MDK.fAug05
Length: 168
Transcript: MDK.fAug05
Exon
Length: 162
Transcript: MDK.fAug05
Length: 162
Transcript: MDK.fAug05
Exon
Length: 356
Transcript: MDK.fAug05
Length: 356
Transcript: MDK.fAug05
Intron
Length: 298
Transcript: MDK.fAug05
Length: 298
Transcript: MDK.fAug05
Intron
Length: 160
Transcript: MDK.fAug05
Length: 160
Transcript: MDK.fAug05
Intron
Length: 125
Transcript: MDK.fAug05
Length: 125
Transcript: MDK.fAug05
Intron
Length: 720
Transcript: MDK.fAug05
Length: 720
Transcript: MDK.fAug05
Exon
Length: 221
Transcript: MDK.gAug05
Length: 221
Transcript: MDK.gAug05
Exon
Length: 77
Transcript: MDK.gAug05
Length: 77
Transcript: MDK.gAug05
Exon
Length: 168
Transcript: MDK.gAug05
Length: 168
Transcript: MDK.gAug05
Exon
Length: 162
Transcript: MDK.gAug05
Length: 162
Transcript: MDK.gAug05
Exon
Length: 369
Transcript: MDK.gAug05
Length: 369
Transcript: MDK.gAug05
Intron
Length: 768
Transcript: MDK.gAug05
Length: 768
Transcript: MDK.gAug05
Intron
Length: 160
Transcript: MDK.gAug05
Length: 160
Transcript: MDK.gAug05
Intron
Length: 125
Transcript: MDK.gAug05
Length: 125
Transcript: MDK.gAug05
Intron
Length: 720
Transcript: MDK.gAug05
Length: 720
Transcript: MDK.gAug05
Exon
Length: 149
Transcript: MDK.hAug05
Length: 149
Transcript: MDK.hAug05
Exon
Length: 77
Transcript: MDK.hAug05
Length: 77
Transcript: MDK.hAug05
Exon
Length: 168
Transcript: MDK.hAug05
Length: 168
Transcript: MDK.hAug05
Exon
Length: 607
Transcript: MDK.hAug05
Length: 607
Transcript: MDK.hAug05
Exon
Length: 338
Transcript: MDK.hAug05
Length: 338
Transcript: MDK.hAug05
Intron
Length: 171
Transcript: MDK.hAug05
Length: 171
Transcript: MDK.hAug05
Intron
Length: 160
Transcript: MDK.hAug05
Length: 160
Transcript: MDK.hAug05
Intron
Length: 125
Transcript: MDK.hAug05
Length: 125
Transcript: MDK.hAug05
Intron
Length: 275
Transcript: MDK.hAug05
Length: 275
Transcript: MDK.hAug05
Reaction
Expected peak: 292
Associated peak: 294,295,296,297
Repeated 51 time
Molarity: 4.05M
Forward: MDK.F16
Reverse: MDK.R10
Expected peak: 292
Associated peak: 294,295,296,297
Repeated 51 time
Molarity: 4.05M
Forward: MDK.F16
Reverse: MDK.R10
Exon
Length: 21
Transcript: MDK.iAug05
Length: 21
Transcript: MDK.iAug05
Exon
Length: 77
Transcript: MDK.iAug05
Length: 77
Transcript: MDK.iAug05
Exon
Length: 168
Transcript: MDK.iAug05
Length: 168
Transcript: MDK.iAug05
Exon
Length: 162
Transcript: MDK.iAug05
Length: 162
Transcript: MDK.iAug05
Exon
Length: 356
Transcript: MDK.iAug05
Length: 356
Transcript: MDK.iAug05
Intron
Length: 302
Transcript: MDK.iAug05
Length: 302
Transcript: MDK.iAug05
Intron
Length: 160
Transcript: MDK.iAug05
Length: 160
Transcript: MDK.iAug05
Intron
Length: 125
Transcript: MDK.iAug05
Length: 125
Transcript: MDK.iAug05
Intron
Length: 720
Transcript: MDK.iAug05
Length: 720
Transcript: MDK.iAug05
Exon
Length: 24
Transcript: MDK.jAug05
Length: 24
Transcript: MDK.jAug05
Exon
Length: 77
Transcript: MDK.jAug05
Length: 77
Transcript: MDK.jAug05
Exon
Length: 168
Transcript: MDK.jAug05
Length: 168
Transcript: MDK.jAug05
Exon
Length: 162
Transcript: MDK.jAug05
Length: 162
Transcript: MDK.jAug05
Exon
Length: 181
Transcript: MDK.jAug05
Length: 181
Transcript: MDK.jAug05
Exon
Length: 92
Transcript: MDK.jAug05
Length: 92
Transcript: MDK.jAug05
Intron
Length: 730
Transcript: MDK.jAug05
Length: 730
Transcript: MDK.jAug05
Intron
Length: 160
Transcript: MDK.jAug05
Length: 160
Transcript: MDK.jAug05
Intron
Length: 125
Transcript: MDK.jAug05
Length: 125
Transcript: MDK.jAug05
Intron
Length: 720
Transcript: MDK.jAug05
Length: 720
Transcript: MDK.jAug05
Intron
Length: 3
Transcript: MDK.jAug05
Length: 3
Transcript: MDK.jAug05
Exon
Length: 131
Transcript: MDK.kAug05
Length: 131
Transcript: MDK.kAug05
Exon
Length: 77
Transcript: MDK.kAug05
Length: 77
Transcript: MDK.kAug05
Exon
Length: 168
Transcript: MDK.kAug05
Length: 168
Transcript: MDK.kAug05
Exon
Length: 162
Transcript: MDK.kAug05
Length: 162
Transcript: MDK.kAug05
Exon
Length: 356
Transcript: MDK.kAug05
Length: 356
Transcript: MDK.kAug05
Intron
Length: 171
Transcript: MDK.kAug05
Length: 171
Transcript: MDK.kAug05
Intron
Length: 160
Transcript: MDK.kAug05
Length: 160
Transcript: MDK.kAug05
Intron
Length: 125
Transcript: MDK.kAug05
Length: 125
Transcript: MDK.kAug05
Intron
Length: 720
Transcript: MDK.kAug05
Length: 720
Transcript: MDK.kAug05
Reaction
Expected peak: 292
Associated peak: 294,295,296,297
Repeated 51 time
Molarity: 4.05M
Forward: MDK.F16
Reverse: MDK.R10
Expected peak: 292
Associated peak: 294,295,296,297
Repeated 51 time
Molarity: 4.05M
Forward: MDK.F16
Reverse: MDK.R10
MDK.F16
GTCTGAGCTGCGTCCTGG
GTCTGAGCTGCGTCCTGG
MDK.R10
ACTCCTTCTTCCAGTTGCAGG
ACTCCTTCTTCCAGTTGCAGG