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Identification of alternative splicing markers for breast cancer
2. Breast Validation Screen
Transcript map
: INSR
Exon
Length: 243
Transcript: INSR.aAug05
Length: 243
Transcript: INSR.aAug05
Exon
Length: 552
Transcript: INSR.aAug05
Length: 552
Transcript: INSR.aAug05
Exon
Length: 322
Transcript: INSR.aAug05
Length: 322
Transcript: INSR.aAug05
Exon
Length: 149
Transcript: INSR.aAug05
Length: 149
Transcript: INSR.aAug05
Exon
Length: 145
Transcript: INSR.aAug05
Length: 145
Transcript: INSR.aAug05
Exon
Length: 215
Transcript: INSR.aAug05
Length: 215
Transcript: INSR.aAug05
Exon
Length: 127
Transcript: INSR.aAug05
Length: 127
Transcript: INSR.aAug05
Exon
Length: 251
Transcript: INSR.aAug05
Length: 251
Transcript: INSR.aAug05
Exon
Length: 168
Transcript: INSR.aAug05
Length: 168
Transcript: INSR.aAug05
Exon
Length: 202
Transcript: INSR.aAug05
Length: 202
Transcript: INSR.aAug05
Exon
Length: 36
Transcript: INSR.aAug05
Length: 36
Transcript: INSR.aAug05
Exon
Length: 275
Transcript: INSR.aAug05
Length: 275
Transcript: INSR.aAug05
Exon
Length: 140
Transcript: INSR.aAug05
Length: 140
Transcript: INSR.aAug05
Exon
Length: 160
Transcript: INSR.aAug05
Length: 160
Transcript: INSR.aAug05
Exon
Length: 103
Transcript: INSR.aAug05
Length: 103
Transcript: INSR.aAug05
Exon
Length: 68
Transcript: INSR.aAug05
Length: 68
Transcript: INSR.aAug05
Exon
Length: 245
Transcript: INSR.aAug05
Length: 245
Transcript: INSR.aAug05
Exon
Length: 111
Transcript: INSR.aAug05
Length: 111
Transcript: INSR.aAug05
Exon
Length: 160
Transcript: INSR.aAug05
Length: 160
Transcript: INSR.aAug05
Exon
Length: 130
Transcript: INSR.aAug05
Length: 130
Transcript: INSR.aAug05
Exon
Length: 135
Transcript: INSR.aAug05
Length: 135
Transcript: INSR.aAug05
Exon
Length: 769
Transcript: INSR.aAug05
Length: 769
Transcript: INSR.aAug05
Intron
Length: 25895
Transcript: INSR.aAug05
Length: 25895
Transcript: INSR.aAug05
Intron
Length: 82707
Transcript: INSR.aAug05
Length: 82707
Transcript: INSR.aAug05
Intron
Length: 9584
Transcript: INSR.aAug05
Length: 9584
Transcript: INSR.aAug05
Intron
Length: 2148
Transcript: INSR.aAug05
Length: 2148
Transcript: INSR.aAug05
Intron
Length: 1538
Transcript: INSR.aAug05
Length: 1538
Transcript: INSR.aAug05
Intron
Length: 2442
Transcript: INSR.aAug05
Length: 2442
Transcript: INSR.aAug05
Intron
Length: 1563
Transcript: INSR.aAug05
Length: 1563
Transcript: INSR.aAug05
Intron
Length: 2954
Transcript: INSR.aAug05
Length: 2954
Transcript: INSR.aAug05
Intron
Length: 10104
Transcript: INSR.aAug05
Length: 10104
Transcript: INSR.aAug05
Intron
Length: 2193
Transcript: INSR.aAug05
Length: 2193
Transcript: INSR.aAug05
Intron
Length: 7406
Transcript: INSR.aAug05
Length: 7406
Transcript: INSR.aAug05
Intron
Length: 999
Transcript: INSR.aAug05
Length: 999
Transcript: INSR.aAug05
Intron
Length: 9359
Transcript: INSR.aAug05
Length: 9359
Transcript: INSR.aAug05
Intron
Length: 3203
Transcript: INSR.aAug05
Length: 3203
Transcript: INSR.aAug05
Intron
Length: 2200
Transcript: INSR.aAug05
Length: 2200
Transcript: INSR.aAug05
Intron
Length: 1056
Transcript: INSR.aAug05
Length: 1056
Transcript: INSR.aAug05
Intron
Length: 2293
Transcript: INSR.aAug05
Length: 2293
Transcript: INSR.aAug05
Intron
Length: 105
Transcript: INSR.aAug05
Length: 105
Transcript: INSR.aAug05
Intron
Length: 1864
Transcript: INSR.aAug05
Length: 1864
Transcript: INSR.aAug05
Intron
Length: 1036
Transcript: INSR.aAug05
Length: 1036
Transcript: INSR.aAug05
Intron
Length: 2038
Transcript: INSR.aAug05
Length: 2038
Transcript: INSR.aAug05
Reaction
Expected peak: 166
Associated peak: 177,178,179,180
Repeated 51 time
Molarity: 4.25M
Forward: INSR.u.f.15
Reverse: INSR.u.r.18
Expected peak: 166
Associated peak: 177,178,179,180
Repeated 51 time
Molarity: 4.25M
Forward: INSR.u.f.15
Reverse: INSR.u.r.18
Reaction
Expected peak: 368
Associated peak: 383,384,385,386,387,388,389
Repeated 51 time
Molarity: 6.51M
Forward: INSR.u.f.13
Reverse: INSR.u.r.17
Expected peak: 368
Associated peak: 383,384,385,386,387,388,389
Repeated 51 time
Molarity: 6.51M
Forward: INSR.u.f.13
Reverse: INSR.u.r.17
Exon
Length: 542
Transcript: INSR.bAug05
Length: 542
Transcript: INSR.bAug05
Exon
Length: 552
Transcript: INSR.bAug05
Length: 552
Transcript: INSR.bAug05
Exon
Length: 322
Transcript: INSR.bAug05
Length: 322
Transcript: INSR.bAug05
Exon
Length: 149
Transcript: INSR.bAug05
Length: 149
Transcript: INSR.bAug05
Exon
Length: 145
Transcript: INSR.bAug05
Length: 145
Transcript: INSR.bAug05
Exon
Length: 215
Transcript: INSR.bAug05
Length: 215
Transcript: INSR.bAug05
Exon
Length: 127
Transcript: INSR.bAug05
Length: 127
Transcript: INSR.bAug05
Exon
Length: 251
Transcript: INSR.bAug05
Length: 251
Transcript: INSR.bAug05
Exon
Length: 168
Transcript: INSR.bAug05
Length: 168
Transcript: INSR.bAug05
Exon
Length: 202
Transcript: INSR.bAug05
Length: 202
Transcript: INSR.bAug05
Exon
Length: 275
Transcript: INSR.bAug05
Length: 275
Transcript: INSR.bAug05
Exon
Length: 140
Transcript: INSR.bAug05
Length: 140
Transcript: INSR.bAug05
Exon
Length: 160
Transcript: INSR.bAug05
Length: 160
Transcript: INSR.bAug05
Exon
Length: 103
Transcript: INSR.bAug05
Length: 103
Transcript: INSR.bAug05
Exon
Length: 68
Transcript: INSR.bAug05
Length: 68
Transcript: INSR.bAug05
Exon
Length: 245
Transcript: INSR.bAug05
Length: 245
Transcript: INSR.bAug05
Exon
Length: 111
Transcript: INSR.bAug05
Length: 111
Transcript: INSR.bAug05
Exon
Length: 160
Transcript: INSR.bAug05
Length: 160
Transcript: INSR.bAug05
Exon
Length: 130
Transcript: INSR.bAug05
Length: 130
Transcript: INSR.bAug05
Exon
Length: 135
Transcript: INSR.bAug05
Length: 135
Transcript: INSR.bAug05
Exon
Length: 5156
Transcript: INSR.bAug05
Length: 5156
Transcript: INSR.bAug05
Intron
Length: 25895
Transcript: INSR.bAug05
Length: 25895
Transcript: INSR.bAug05
Intron
Length: 82707
Transcript: INSR.bAug05
Length: 82707
Transcript: INSR.bAug05
Intron
Length: 9584
Transcript: INSR.bAug05
Length: 9584
Transcript: INSR.bAug05
Intron
Length: 2148
Transcript: INSR.bAug05
Length: 2148
Transcript: INSR.bAug05
Intron
Length: 1538
Transcript: INSR.bAug05
Length: 1538
Transcript: INSR.bAug05
Intron
Length: 2442
Transcript: INSR.bAug05
Length: 2442
Transcript: INSR.bAug05
Intron
Length: 1563
Transcript: INSR.bAug05
Length: 1563
Transcript: INSR.bAug05
Intron
Length: 2954
Transcript: INSR.bAug05
Length: 2954
Transcript: INSR.bAug05
Intron
Length: 10104
Transcript: INSR.bAug05
Length: 10104
Transcript: INSR.bAug05
Intron
Length: 9635
Transcript: INSR.bAug05
Length: 9635
Transcript: INSR.bAug05
Intron
Length: 999
Transcript: INSR.bAug05
Length: 999
Transcript: INSR.bAug05
Intron
Length: 9359
Transcript: INSR.bAug05
Length: 9359
Transcript: INSR.bAug05
Intron
Length: 3203
Transcript: INSR.bAug05
Length: 3203
Transcript: INSR.bAug05
Intron
Length: 2200
Transcript: INSR.bAug05
Length: 2200
Transcript: INSR.bAug05
Intron
Length: 1056
Transcript: INSR.bAug05
Length: 1056
Transcript: INSR.bAug05
Intron
Length: 2293
Transcript: INSR.bAug05
Length: 2293
Transcript: INSR.bAug05
Intron
Length: 105
Transcript: INSR.bAug05
Length: 105
Transcript: INSR.bAug05
Intron
Length: 1864
Transcript: INSR.bAug05
Length: 1864
Transcript: INSR.bAug05
Intron
Length: 1036
Transcript: INSR.bAug05
Length: 1036
Transcript: INSR.bAug05
Intron
Length: 2038
Transcript: INSR.bAug05
Length: 2038
Transcript: INSR.bAug05
Reaction
Expected peak: 130
Associated peak: 139,140,141,142
Repeated 51 time
Molarity: 8.14M
Forward: INSR.u.f.15
Reverse: INSR.u.r.18
Expected peak: 130
Associated peak: 139,140,141,142
Repeated 51 time
Molarity: 8.14M
Forward: INSR.u.f.15
Reverse: INSR.u.r.18
Reaction
Expected peak: 332
Associated peak: 337,338,339,340,341,342,343,351
Repeated 51 time
Molarity: 14.67M
Forward: INSR.u.f.13
Reverse: INSR.u.r.17
Expected peak: 332
Associated peak: 337,338,339,340,341,342,343,351
Repeated 51 time
Molarity: 14.67M
Forward: INSR.u.f.13
Reverse: INSR.u.r.17
Exon
Length: 75
Transcript: INSR.cAug05
Length: 75
Transcript: INSR.cAug05
Exon
Length: 552
Transcript: INSR.cAug05
Length: 552
Transcript: INSR.cAug05
Exon
Length: 322
Transcript: INSR.cAug05
Length: 322
Transcript: INSR.cAug05
Exon
Length: 149
Transcript: INSR.cAug05
Length: 149
Transcript: INSR.cAug05
Exon
Length: 145
Transcript: INSR.cAug05
Length: 145
Transcript: INSR.cAug05
Exon
Length: 215
Transcript: INSR.cAug05
Length: 215
Transcript: INSR.cAug05
Exon
Length: 127
Transcript: INSR.cAug05
Length: 127
Transcript: INSR.cAug05
Exon
Length: 251
Transcript: INSR.cAug05
Length: 251
Transcript: INSR.cAug05
Exon
Length: 168
Transcript: INSR.cAug05
Length: 168
Transcript: INSR.cAug05
Exon
Length: 942
Transcript: INSR.cAug05
Length: 942
Transcript: INSR.cAug05
Intron
Length: 25895
Transcript: INSR.cAug05
Length: 25895
Transcript: INSR.cAug05
Intron
Length: 82707
Transcript: INSR.cAug05
Length: 82707
Transcript: INSR.cAug05
Intron
Length: 9584
Transcript: INSR.cAug05
Length: 9584
Transcript: INSR.cAug05
Intron
Length: 2148
Transcript: INSR.cAug05
Length: 2148
Transcript: INSR.cAug05
Intron
Length: 1538
Transcript: INSR.cAug05
Length: 1538
Transcript: INSR.cAug05
Intron
Length: 2442
Transcript: INSR.cAug05
Length: 2442
Transcript: INSR.cAug05
Intron
Length: 1563
Transcript: INSR.cAug05
Length: 1563
Transcript: INSR.cAug05
Intron
Length: 2954
Transcript: INSR.cAug05
Length: 2954
Transcript: INSR.cAug05
Intron
Length: 10104
Transcript: INSR.cAug05
Length: 10104
Transcript: INSR.cAug05
Exon
Length: 11
Transcript: INSR.dAug05
Length: 11
Transcript: INSR.dAug05
Exon
Length: 251
Transcript: INSR.dAug05
Length: 251
Transcript: INSR.dAug05
Exon
Length: 168
Transcript: INSR.dAug05
Length: 168
Transcript: INSR.dAug05
Exon
Length: 218
Transcript: INSR.dAug05
Length: 218
Transcript: INSR.dAug05
Intron
Length: 1563
Transcript: INSR.dAug05
Length: 1563
Transcript: INSR.dAug05
Intron
Length: 2954
Transcript: INSR.dAug05
Length: 2954
Transcript: INSR.dAug05
Intron
Length: 3386
Transcript: INSR.dAug05
Length: 3386
Transcript: INSR.dAug05
Exon
Length: 225
Transcript: INSR.eAug05
Length: 225
Transcript: INSR.eAug05
Exon
Length: 579
Transcript: INSR.eAug05
Length: 579
Transcript: INSR.eAug05
Intron
Length: 999
Transcript: INSR.eAug05
Length: 999
Transcript: INSR.eAug05
Exon
Length: 280
Transcript: INSR.fAug05
Length: 280
Transcript: INSR.fAug05
Exon
Length: 160
Transcript: INSR.fAug05
Length: 160
Transcript: INSR.fAug05
Exon
Length: 129
Transcript: INSR.fAug05
Length: 129
Transcript: INSR.fAug05
Intron
Length: 105
Transcript: INSR.fAug05
Length: 105
Transcript: INSR.fAug05
Intron
Length: 1864
Transcript: INSR.fAug05
Length: 1864
Transcript: INSR.fAug05
Exon
Length: 104
Transcript: INSR.gAug05
Length: 104
Transcript: INSR.gAug05
Exon
Length: 111
Transcript: INSR.gAug05
Length: 111
Transcript: INSR.gAug05
Exon
Length: 204
Transcript: INSR.gAug05
Length: 204
Transcript: INSR.gAug05
Exon
Length: 35
Transcript: INSR.gAug05
Length: 35
Transcript: INSR.gAug05
Intron
Length: 2293
Transcript: INSR.gAug05
Length: 2293
Transcript: INSR.gAug05
Intron
Length: 105
Transcript: INSR.gAug05
Length: 105
Transcript: INSR.gAug05
Intron
Length: 1820
Transcript: INSR.gAug05
Length: 1820
Transcript: INSR.gAug05
Exon
Length: 155
Transcript: INSR.hAug05
Length: 155
Transcript: INSR.hAug05
Exon
Length: 188
Transcript: INSR.hAug05
Length: 188
Transcript: INSR.hAug05
Intron
Length: 2954
Transcript: INSR.hAug05
Length: 2954
Transcript: INSR.hAug05
Exon
Length: 409
Transcript: INSR.shed1.aAug05
Length: 409
Transcript: INSR.shed1.aAug05
Exon
Length: 713
Transcript: INSR.shed2.aAug05
Length: 713
Transcript: INSR.shed2.aAug05
Exon
Length: 139
Transcript: INSR.shed3.aAug05
Length: 139
Transcript: INSR.shed3.aAug05
Exon
Length: 228
Transcript: INSR.shed4.aAug05
Length: 228
Transcript: INSR.shed4.aAug05
Exon
Length: 1941
Transcript: INSR.shed5.aAug05
Length: 1941
Transcript: INSR.shed5.aAug05
INSR.u.f.15
TGAGGATTACCTGCACAACG
TGAGGATTACCTGCACAACG
INSR.u.r.17
ACCGTCACATTCCCAACATC
ACCGTCACATTCCCAACATC
INSR.u.r.18
GCTGGTCGAGGAAGTGTTG
GCTGGTCGAGGAAGTGTTG
INSR.u.f.13
GGCAACATCACCCACTACCT
GGCAACATCACCCACTACCT