Back to Rnomics Platform
Open Session
×
1 warning:
- Access restricted to public data.
Please sign in at Rnomics Platform to access your data.
Home
Supplementary data
Tumor microenvironment associated modifications of alternative splicing
Splicing factor knockdown
Validation
XAB2
QPCR Primer Pair List
: primer pair list
| Gene | Forward | Reverse | |
|---|---|---|---|
| VIEW | HNRNPA1 | HNRNPA1_G_f | HNRNPA1_G_r |
| VIEW | PSMC4 | PSMC4_G_1_f | PSMC4_G_1_r |
| VIEW | RNPC3 | RNPC3_G_f | RNPC3_G_r |
| VIEW | SDHA | SDHA_G_f | SDHA_G_r |
| VIEW | U1SNRNPBP | U1SNRNPBP_G_1_f | U1SNRNPBP_G_1_r |
| VIEW | WBP4 | WBP4_G_f | WBP4_G_1_r |
| VIEW | XAB2 | XAB2.G1.F1 | XAB2.G1.R1 |
| VIEW | ZCCHC8 | ZCCHC8_G_f | ZCCHC8_G_r |
| VIEW | ZRSR2 | ZRSR2_G_f | ZRSR2_G_1_r |
current - show all
Page 1 of 1, records 1 to 9 of 9
QPCR Relative Expression Quantification (N1-3)
: Summary
Expression Table
| ID | Name |
|---|---|
| 1 | HNRPA1__G_1_s;SKOV3ip1 |
| 2 | HNRPA1__G_s;SKOV3ip1 |
| 3 | KITLG_84_L_2_s;SKOV3ip1 |
| 4 | RNPC3__G_1_s;SKOV3ip1 |
| 5 | RNPC3__G_s;SKOV3ip1 |
| 6 | SKOV3ip1;Lipofectamine 2000 |
| 7 | U1SNRNPBP__G_1_s;SKOV3ip1 |
| 8 | U1SNRNPBP__G_s;SKOV3ip1 |
| 9 | WBP4__G_1_s;SKOV3ip1 |
| 10 | WBP4__G_s;SKOV3ip1 |
| 11 | XAB2__G_1_s;SKOV3ip1 |
| 12 | XAB2__G_s;SKOV3ip1 |
| 13 | ZCCHC8__G_1_s;SKOV3ip1 |
| 14 | ZCCHC8__G_s;SKOV3ip1 |
| 15 | ZRSR2__G_1_s;SKOV3ip1 |
| 16 | ZRSR2__G_s;SKOV3ip1 |
current - show all
Page 1 of 1, records 1 to 16 of 16
| Primer Pair | S1 | p1 | S2 | p2 | S3 | p3 | S4 | p4 | S5 | p5 | S6 | p6 | S7 | p7 | S8 | p8 | S9 | p9 | S10 | p10 | S11 | p11 | S12 | p12 | S13 | p13 | S14 | p14 | S15 | p15 | S16 | p16 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HNRNPA1_G_f HNRNPA1_G_r | 1.449 | 0.486 | 0.961 | 1.000 | ||||||||||||||||||||||||||||
| RNPC3_G_f RNPC3_G_r | 1.074 | 4.757 | 3.171 | 1.000 | ||||||||||||||||||||||||||||
| U1SNRNPBP_G_1_f U1SNRNPBP_G_1_r | 1.000 | 3.160 | ||||||||||||||||||||||||||||||
| WBP4_G_f WBP4_G_1_r | 1.048 | 1.000 | 3.021 | 3.986 | ||||||||||||||||||||||||||||
| XAB2.G1.F1 XAB2.G1.R1 | 0.869 | 1.000 | 0.147 | 0.349 | ||||||||||||||||||||||||||||
| ZCCHC8_G_f ZCCHC8_G_r | 1.104 | 1.000 | 3.227 | 2.713 | ||||||||||||||||||||||||||||
| ZRSR2_G_f ZRSR2_G_1_r | 0.800 | 1.000 | 3.340 | 3.458 |
current - show all
Page 1 of 1, records 1 to 7 of 7
QPCR Relative Expression Quantification (N1)
: Summary
Expression Table
| ID | Name |
|---|---|
| 1 | HNRPA1__G_1_s;SKOV3ip1 |
| 2 | HNRPA1__G_s;SKOV3ip1 |
| 3 | KITLG_84_L_2_s;SKOV3ip1 |
| 4 | RNPC3__G_1_s;SKOV3ip1 |
| 5 | RNPC3__G_s;SKOV3ip1 |
| 6 | SKOV3ip1;Lipofectamine 2000 |
| 7 | U1SNRNPBP__G_1_s;SKOV3ip1 |
| 8 | U1SNRNPBP__G_s;SKOV3ip1 |
| 9 | WBP4__G_1_s;SKOV3ip1 |
| 10 | WBP4__G_s;SKOV3ip1 |
| 11 | XAB2__G_1_s;SKOV3ip1 |
| 12 | XAB2__G_s;SKOV3ip1 |
| 13 | ZCCHC8__G_1_s;SKOV3ip1 |
| 14 | ZCCHC8__G_s;SKOV3ip1 |
| 15 | ZRSR2__G_1_s;SKOV3ip1 |
| 16 | ZRSR2__G_s;SKOV3ip1 |
current - show all
Page 1 of 1, records 1 to 16 of 16
| Primer Pair | S1 | p1 | S2 | p2 | S3 | p3 | S4 | p4 | S5 | p5 | S6 | p6 | S7 | p7 | S8 | p8 | S9 | p9 | S10 | p10 | S11 | p11 | S12 | p12 | S13 | p13 | S14 | p14 | S15 | p15 | S16 | p16 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HNRNPA1_G_f HNRNPA1_G_r | 1.449 | 0.486 | 0.961 | 1.000 | ||||||||||||||||||||||||||||
| RNPC3_G_f RNPC3_G_r | 1.074 | 4.757 | 3.171 | 1.000 | ||||||||||||||||||||||||||||
| U1SNRNPBP_G_1_f U1SNRNPBP_G_1_r | 1.000 | 3.160 | ||||||||||||||||||||||||||||||
| WBP4_G_f WBP4_G_1_r | 1.048 | 1.000 | 3.021 | 3.986 | ||||||||||||||||||||||||||||
| XAB2.G1.F1 XAB2.G1.R1 | 0.869 | 1.000 | 0.147 | 0.349 | ||||||||||||||||||||||||||||
| ZCCHC8_G_f ZCCHC8_G_r | 1.104 | 1.000 | 3.227 | 2.713 | ||||||||||||||||||||||||||||
| ZRSR2_G_f ZRSR2_G_1_r | 0.800 | 1.000 | 3.340 | 3.458 |
current - show all
Page 1 of 1, records 1 to 7 of 7
QPCR Relative Expression Quantification (N2)
: Summary
Expression Table
| ID | Name |
|---|---|
| 1 | HNRPA1__G_1_s;SKOV3ip1 |
| 2 | HNRPA1__G_s;SKOV3ip1 |
| 3 | KITLG_84_L_2_s;SKOV3ip1 |
| 4 | RNPC3__G_1_s;SKOV3ip1 |
| 5 | RNPC3__G_s;SKOV3ip1 |
| 6 | SKOV3ip1;Lipofectamine 2000 |
| 7 | U1SNRNPBP__G_1_s;SKOV3ip1 |
| 8 | U1SNRNPBP__G_s;SKOV3ip1 |
| 9 | WBP4__G_1_s;SKOV3ip1 |
| 10 | WBP4__G_s;SKOV3ip1 |
| 11 | XAB2__G_1_s;SKOV3ip1 |
| 12 | XAB2__G_s;SKOV3ip1 |
| 13 | ZCCHC8__G_1_s;SKOV3ip1 |
| 14 | ZCCHC8__G_s;SKOV3ip1 |
| 15 | ZRSR2__G_1_s;SKOV3ip1 |
| 16 | ZRSR2__G_s;SKOV3ip1 |
current - show all
Page 1 of 1, records 1 to 16 of 16
| Primer Pair | S1 | p1 | S2 | p2 | S3 | p3 | S4 | p4 | S5 | p5 | S6 | p6 | S7 | p7 | S8 | p8 | S9 | p9 | S10 | p10 | S11 | p11 | S12 | p12 | S13 | p13 | S14 | p14 | S15 | p15 | S16 | p16 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HNRNPA1_G_f HNRNPA1_G_r | 1.449 | 0.486 | 0.961 | 1.000 | ||||||||||||||||||||||||||||
| RNPC3_G_f RNPC3_G_r | 1.074 | 4.757 | 3.171 | 1.000 | ||||||||||||||||||||||||||||
| U1SNRNPBP_G_1_f U1SNRNPBP_G_1_r | 1.000 | 3.160 | ||||||||||||||||||||||||||||||
| WBP4_G_f WBP4_G_1_r | 1.048 | 1.000 | 3.021 | 3.986 | ||||||||||||||||||||||||||||
| XAB2.G1.F1 XAB2.G1.R1 | 0.869 | 1.000 | 0.147 | 0.349 | ||||||||||||||||||||||||||||
| ZCCHC8_G_f ZCCHC8_G_r | 1.104 | 1.000 | 3.227 | 2.713 | ||||||||||||||||||||||||||||
| ZRSR2_G_f ZRSR2_G_1_r | 0.800 | 1.000 | 3.340 | 3.458 |
current - show all
Page 1 of 1, records 1 to 7 of 7
QPCR Relative Expression Quantification (N3)
: Summary
Expression Table
| ID | Name |
|---|---|
| 1 | HNRPA1__G_1_s;SKOV3ip1 |
| 2 | HNRPA1__G_s;SKOV3ip1 |
| 3 | KITLG_84_L_2_s;SKOV3ip1 |
| 4 | RNPC3__G_1_s;SKOV3ip1 |
| 5 | RNPC3__G_s;SKOV3ip1 |
| 6 | SKOV3ip1;Lipofectamine 2000 |
| 7 | U1SNRNPBP__G_1_s;SKOV3ip1 |
| 8 | U1SNRNPBP__G_s;SKOV3ip1 |
| 9 | WBP4__G_1_s;SKOV3ip1 |
| 10 | WBP4__G_s;SKOV3ip1 |
| 11 | XAB2__G_1_s;SKOV3ip1 |
| 12 | XAB2__G_s;SKOV3ip1 |
| 13 | ZCCHC8__G_1_s;SKOV3ip1 |
| 14 | ZCCHC8__G_s;SKOV3ip1 |
| 15 | ZRSR2__G_1_s;SKOV3ip1 |
| 16 | ZRSR2__G_s;SKOV3ip1 |
current - show all
Page 1 of 1, records 1 to 16 of 16
| Primer Pair | S1 | p1 | S2 | p2 | S3 | p3 | S4 | p4 | S5 | p5 | S6 | p6 | S7 | p7 | S8 | p8 | S9 | p9 | S10 | p10 | S11 | p11 | S12 | p12 | S13 | p13 | S14 | p14 | S15 | p15 | S16 | p16 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HNRNPA1_G_f HNRNPA1_G_r | 1.449 | 0.486 | 0.961 | 1.000 | ||||||||||||||||||||||||||||
| RNPC3_G_f RNPC3_G_r | 1.074 | 4.757 | 3.171 | 1.000 | ||||||||||||||||||||||||||||
| U1SNRNPBP_G_1_f U1SNRNPBP_G_1_r | 1.000 | 3.160 | ||||||||||||||||||||||||||||||
| WBP4_G_f WBP4_G_1_r | 1.048 | 1.000 | 3.021 | 3.986 | ||||||||||||||||||||||||||||
| XAB2.G1.F1 XAB2.G1.R1 | 0.869 | 1.000 | 0.147 | 0.349 | ||||||||||||||||||||||||||||
| ZCCHC8_G_f ZCCHC8_G_r | 1.104 | 1.000 | 3.227 | 2.713 | ||||||||||||||||||||||||||||
| ZRSR2_G_f ZRSR2_G_1_r | 0.800 | 1.000 | 3.340 | 3.458 |
current - show all
Page 1 of 1, records 1 to 7 of 7
QPCR Relative Expression Quantification (N1-3)
: Systematic Outlier Filtering
0 technical replicates removed (absolute Ct threshold 0.75; MADZ 3.5)
Click here to view
0 biological replicates removed (relative expression threshold 0.25; MADZ 2.1)
Click here to view
QPCR Relative Expression Quantification (N1)
: Systematic Outlier Filtering
0 technical replicates removed (absolute Ct threshold 0.75; MADZ 3.5)
Click here to view
0 biological replicates removed (relative expression threshold 0.25; MADZ 2.1)
Click here to view
QPCR Relative Expression Quantification (N2)
: Systematic Outlier Filtering
0 technical replicates removed (absolute Ct threshold 0.75; MADZ 3.5)
Click here to view
0 biological replicates removed (relative expression threshold 0.25; MADZ 2.1)
Click here to view
QPCR Relative Expression Quantification (N3)
: Systematic Outlier Filtering
0 technical replicates removed (absolute Ct threshold 0.75; MADZ 3.5)
Click here to view
0 biological replicates removed (relative expression threshold 0.25; MADZ 2.1)
Click here to view
QPCR Reference Gene Page (N1-3)
: .
QPCR Reference Gene Page (N1)
: .
QPCR Reference Gene Page (N2)
: .
QPCR Reference Gene Page (N3)
: .
Copyright ©2008,2017, all rights reserved. 