07. Fox2 Targets - Cancer Validations

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Home Public data LGFUS Public Data Cancer-associated regulation of alternative splicing 07. Fox2 Targets - Cancer Validations

07. Fox2 Targets - Cancer Validations ⚙

Documentation : Association Screens

This page contains links to the data for the association screen for fox targets in 25 normal ovary samples, 21 ovarian cancer samples, 20 normal breast samples and 26 breast cancer samples. These data can be viewed in several different portals that each ultimately link to the raw data.

Histograms. This links to the distributions of splicing outcomes for the tissues from most to least significant discriminator
Heatmap. This show the raw psi values for the whole association screen.
Gene list. Shows data by individual ASE
Raw data spreadsheets

Histrograms for Group Comparison

Histograms

PSI Values Heatmap

Heatmap

Gene list : Gene list

Gene	Reactions	Links
ABI1	92	AceView 35.4 ABI1, NCBIGene 36.2 ABI1, AceView 36.Apr07 ABI1
ACATE2	92	AceView 35.4 ACATE2, NCBIGene 36.2 ACOT9, AceView 36.Apr07 ACOT9
ADD3	92	AceView 35.4 ADD3, NCBIGene 36.2 ADD3, AceView 36.Apr07 ADD3
AKAP11	92	AceView 35.4 AKAP11, NCBIGene 36.2 AKAP11, AceView 36.Apr07 AKAP11
APBB2	92	AceView 35.4 APBB2, NCBIGene 36.2 APBB2, AceView 36.Apr07 APBB2
APP	92	AceView 35.4 APP, NCBIGene 36.2 APP, AceView 36.Apr07 APP
ARID1B	92	AceView 35.4 ARID1B, NCBIGene 36.2 ARID1B, AceView 36.Apr07 ARID1B
ARNT	92	NCBIGene 36.2 ARNT, AceView 36.Apr07 ARNT
ATP11C	92	AceView 35.4 ATP11C, NCBIGene 36.2 ATP11C, AceView 36.Apr07 ATP11C
ATXN7L4	92	NCBIGene 36.2 ATXN7L4, AceView 36.Apr07 ATXN7L4
An_peroxidase.0	92	AceView 36.Apr07 An_peroxidase.0
BCMP11	130	AceView 35.4 BCMP11, NCBIGene 36.2 BCMP11
C12orf8	92	AceView 35.4 C12orf8, NCBIGene 36.2 ERP29, AceView 36.Apr07 ERP29
C18orf1	92	AceView 35.4 C18orf1, NCBIGene 36.2 C18orf1, AceView 36.Apr07 C18orf1
C18orf58	92	NCBIGene 36.2 C18orf58, AceView 36.Apr07 C18orf58
C20orf18	92	AceView 35.4 C20orf18, NCBIGene 36.2 RBCK1, AceView 36.Apr07 RBCK1
CA12	92	AceView 35.4 CA12, NCBIGene 36.2 CA12, AceView 36.Apr07 CA12
CAMKK2	92	AceView 35.4 CAMKK2, NCBIGene 36.2 CAMKK2, AceView 36.Apr07 CAMKK2
CLSTN1	92	AceView 35.4 CLSTN1, NCBIGene 36.2 CLSTN1, AceView 36.Apr07 CLSTN1
CNNM2	92	AceView 35.4 CNNM2, NCBIGene 36.2 CNNM2, AceView 36.Apr07 CNNM2

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Page 1 of 6, records 1 to 20 of 103

Computation of PSI values : Access to Raw Data File

Psi values: download to file | view in browser