5. CASita plate / RBP knockdowns - Rnomics 📊 Palace

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Home Supplementary data RBFOX2 enforces the mesenchymal splicing signature in normal and cancer tissues 5. CASita plate / RBP knockdowns

5. CASita plate / RBP knockdowns ⚙

delta-PSI Representation : .

Data file

Click here to download (XLSX)

Heatmap

PSI Representation : .

Data file

Click here to download (XLSX)

Heatmap (part 1/1)

Peak Ratio Bar : All ratio bars

View

Peak Ratio Data : data sheet

Using Unexpected peak alignment in 7.50%, [90,1000], > 4.00 nM
Using Wallace-style peak matching with new calibration
Using Expected peaks based on target genes

Gene list : Gene list

Gene	Reactions	Links
AKAP13	897	AceView 35.4 AKAP13
APAF1	897	AceView 35.4 APAF1, AceView 35.4 APAF1, AceView 35.4 APAF1
APG5L	897	AceView 35.2 APG5L
AXIN1	897	AceView 35.4 AXIN1, AceView 35.4 AXIN1
BCL2L1	897	AceView 35.4 BCL2L1, AceView 35.4 BCL2L1
BCL2L12	897	EnsEMBL v18.34.1 BCL2L12, EnsEMBL v18.34.1 BCL2L12
C11ORF4	897	AceView 35.4 C11ORF4, AceView 35.4 C11ORF4
C11orf17	897	EnsEMBL v18.34.1 C11orf17, EnsEMBL v18.34.1 C11orf17
C1orf16	897	AceView 35.4 C1orf16, AceView 35.4 C1orf16
CHEK2	897	AceView 35.4 CHEK2, AceView 35.4 CHEK2
DDR1	897	AceView 35.4 DDR1
DNMT3B	897	AceView 35.4 DNMT3B, AceView 35.4 DNMT3B
DRF1	897	AceView 35.4 DRF1, AceView 35.4 DRF1
ECT2	897	AceView 35.4 ECT2, AceView 35.4 ECT2
F3	897	AceView 35.4 F3, AceView 35.4 F3
FANCA	897	AceView 35.4 FANCA, AceView 35.4 FANCA, AceView 35.4 FANCA
FANCL	897	AceView 35.4 FANCL, AceView 35.4 FANCL, AceView 35.4 FANCL
FGFR1	897	AceView 35.4 FGFR1, AceView 35.4 FGFR1, AceView 35.4 FGFR1
FGFR1OP	897	AceView 35.4 FGFR1OP, AceView 35.4 FGFR1OP
FN1	2691	AceView 35.4 FN1

current 2 3 - show all

Data file

Heatmap

Data file

Heatmap (part 1/1)

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