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Supplementary data
Transient depletions of RNPS1 leads to perdurable changes in alternative splicing
1. ASPCR PSI and raw data
Peak Ratio Bar
: PPIP5K1
PSI Representation
: PPIP5K1
Peak Align
: K-mean peak align report
| expected | 130 | 193 | 313 | |||||
|---|---|---|---|---|---|---|---|---|
| centroid | 61 | 138 | 206 | 263 | 288 | 321 | 414 | 523 |
| HCT116 clone1 t0 | 60 | 138 | 207 | 265 | 290 | |||
| HCT116 clone1 t7 | 140 | 207 | 253 | 278 | ||||
| HCT116 clone1 t14 | 141 | 208 | 266 | 291 | ||||
| HCT116 clone1 t42 | 142 | 207 | 267 | 291 | ||||
| HCT116 clone1 delta-RNPS1 | 142 | 210 | 260 | 286 | ||||
| HCT116 clone1 PER | 146 | 216 | 432 | 523 | ||||
| HCT116 clone2 t0 | 139 | 211 | 325 | 417 | ||||
| HCT116 clone2 t7 | 136 | 204 | 269 | 294 | ||||
| HCT116 clone2 t14 | 140 | 210 | 311 | 391 | ||||
| HCT116 clone2 t42 | 136 | 204 | 269 | 294 | ||||
| HCT116 clone2 delta-RNPS1 | 139 | 210 | 328 | 414 | ||||
| HCT116 clone2 PER | 136 | 204 | 267 | 291 | ||||
| HCT116 clone2 no emetine | 137 | 204 | 267 | 290 | ||||
| HCT116 clone2 emetine | 137 | 204 | 266 | 290 | ||||
| HCT116 clone3 t0 | 63 | 137 | 204 | 255 | 278 | |||
| HCT116 clone3 t7 | 60 | 138 | 205 | 261 | 285 | |||
| HCT116 clone3 t14 | 139 | 207 | 263 | 288 | ||||
| HCT116 clone3 t42 | 139 | 206 | 262 | 288 | ||||
| HCT116 clone3 delta-RNPS1 | 62 | 136 | 204 | 253 | 277 | |||
| HCT116 clone3 PER | 61 | 139 | 206 | 261 | 286 | |||
| HCT116 clone3 no emetine | 137 | 204 | 263 | 287 | ||||
| HCT116 clone3 emetine | 137 | 204 | 263 | 288 | ||||
| HIEC clone1 t0 | 139 | 205 | 286 | 318 | ||||
| HIEC clone1 t14 | 135 | 202 | 292 | 323 | ||||
| HIEC clone2 t0 | 139 | 205 | 286 | 318 | ||||
| HIEC clone2 t14 | 137 | 202 | 293 | 326 | ||||
| HIEC clone3 t0 | 138 | 204 | 287 | 315 | ||||
| HIEC clone3 t14 | 138 | 203 | 300 |
Electropherogram
: PPIP5K1 -- HCT116 clone1 t0 -- CM026797:E10 -- 2876073
Electropherogram
: PPIP5K1 -- HCT116 clone1 t7 -- CM026347:E10 -- 2792736
Electropherogram
: PPIP5K1 -- HCT116 clone1 t14 -- CM026626:I19 -- 2851554
Electropherogram
: PPIP5K1 -- HCT116 clone1 t42 -- CM026626:J19 -- 2851578
Electropherogram
: PPIP5K1 -- HCT116 clone1 delta-RNPS1 -- CM026346:E10 -- 2792640
Electropherogram
: PPIP5K1 -- HCT116 clone1 PER -- CM026500:I19 -- 2821017
Electropherogram
: PPIP5K1 -- HCT116 clone2 t0 -- CM027857:I19 -- 3032994
Electropherogram
: PPIP5K1 -- HCT116 clone2 t7 -- CM028036:J20 -- 3080155
Electropherogram
: PPIP5K1 -- HCT116 clone2 t14 -- CM028038:E10 -- 3080745
Electropherogram
: PPIP5K1 -- HCT116 clone2 t42 -- CM028036:J19 -- 3080154
Electropherogram
: PPIP5K1 -- HCT116 clone2 delta-RNPS1 -- CM027857:I20 -- 3032995
Electropherogram
: PPIP5K1 -- HCT116 clone2 PER -- CM028036:I20 -- 3080131
Electropherogram
: PPIP5K1 -- HCT116 clone2 no emetine -- CM028508:J19 -- 3170010
Electropherogram
: PPIP5K1 -- HCT116 clone2 emetine -- CM028508:J20 -- 3170011
Electropherogram
: PPIP5K1 -- HCT116 clone3 t0 -- CM028337:I19 -- 3136002
Electropherogram
: PPIP5K1 -- HCT116 clone3 t7 -- CM028338:I20 -- 3136387
Electropherogram
: PPIP5K1 -- HCT116 clone3 t14 -- CM028338:J19 -- 3136410
Electropherogram
: PPIP5K1 -- HCT116 clone3 t42 -- CM028338:J20 -- 3136411
Electropherogram
: PPIP5K1 -- HCT116 clone3 delta-RNPS1 -- CM028337:I20 -- 3136003
Electropherogram
: PPIP5K1 -- HCT116 clone3 PER -- CM028338:I19 -- 3136386
Electropherogram
: PPIP5K1 -- HCT116 clone3 no emetine -- CM028508:I19 -- 3169986
Electropherogram
: PPIP5K1 -- HCT116 clone3 emetine -- CM028508:I20 -- 3169987
Electropherogram
: PPIP5K1 -- HIEC clone1 t0 -- CM028694:I19 -- 3206082
Electropherogram
: PPIP5K1 -- HIEC clone1 t14 -- CM028695:J19 -- 3206490
Electropherogram
: PPIP5K1 -- HIEC clone2 t0 -- CM028694:I20 -- 3206083
Electropherogram
: PPIP5K1 -- HIEC clone2 t14 -- CM028695:J20 -- 3206491
Electropherogram
: PPIP5K1 -- HIEC clone3 t0 -- CM028694:J19 -- 3206106
Electropherogram
: PPIP5K1 -- HIEC clone3 t14 -- CM028696:E10 -- 3206697
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